ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100499942	protein YABBY 15
gma-r.7	100499942	protein YABBY 15
gma-m.5	100499942	protein YABBY 15
gma-u.5	100785458	protein YABBY 12
gma-u.5	100500091	protein YABBY 11
gma-u.5	100500026	protein YABBY 9
mtr-u.5	11416031	putative axial regulator YABBY 2
mtr-u.5	11446936	putative axial regulator YABBY 2
ppo-u.5	7470091	axial regulator YABBY 5
ppo-u.5	7472992	axial regulator YABBY 5
ath-u.5	YAB5	plant-specific transcription factor YABBY family protein
ath-u.5	YAB2	Plant-specific transcription factor YABBY family protein
bra-r.6	103836389	putative axial regulator YABBY 2
bra-r.6	103858348	axial regulator YABBY 5
vvi-u.5	100267536	axial regulator YABBY 5
vvi-u.5	100256505	putative axial regulator YABBY 2
vvi-u.5	100254328	axial regulator YABBY 5
ghi-r.1	107917100	axial regulator YABBY 5
ghi-r.1	107907328	axial regulator YABBY 5
ghi-r.1	107901565	putative axial regulator YABBY 2
bna-r.1	106346333	putative axial regulator YABBY 2
bna-r.1	106377031	putative axial regulator YABBY 2
bna-r.1	106414914	putative axial regulator YABBY 2
cit-r.1	102624359	putative axial regulator YABBY 2
cit-r.1	102611194	axial regulator YABBY 5
sly-u.5	YABBY5a	axial regulator YABBY5a
sly-u.5	YABBY2	YABBY transcription factor
sly-u.5	YABBY2a	putative axial regulator YABBY 2a
sot-r.1	102597616	axial regulator YABBY 5-like
sot-r.1	102605344	putative axial regulator YABBY 2
sot-r.1	102581691	putative axial regulator YABBY 2
nta-r.1	107763706	axial regulator YABBY 5
nta-r.1	107808962	axial regulator YABBY 5
nta-r.1	107785164	axial regulator YABBY 5-like
osa-u.5	4333584	protein YABBY 2-like
osa-u.5	4342449	protein YABBY 1-like
osa-u.5	4352818	protein YABBY 6-like
zma-u.5	100272921	uncharacterized LOC100272921
zma-u.5	100273901	uncharacterized LOC100273901
zma-u.5	100283014	uncharacterized LOC100283014
tae-r.2	100192178	protein YABBY 2
tae-r.2	123122693	protein YABBY 2
hvu-r.1	123452083	protein YABBY 2-like
sbi-r.1	8071489	protein YABBY 6
bdi-r.1	100827245	protein YABBY 2
bdi-r.1	100826382	protein YABBY 6
bdi-r.1	100837815	protein YABBY 1

Top 50 coexpressed genes to 100499942 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100499942 (gma-u.5 coexpression data)

CoexMap"100499942"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045165 [list] [network] cell fate commitment	(44 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(415 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

Protein

NP_001238347.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, E.R. 2, chlo 1, nucl 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1

(predict for NP_001238347.1)

Subcellular
localization
TargetP

other 3

(predict for NP_001238347.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100499942	gma-r.7 for 100499942	gma-m.5 for 100499942	gma-u.5 for 100785458	gma-u.5 for 100500091	gma-u.5 for 100500026	mtr-u.5 for 11416031	mtr-u.5 for 11446936	ppo-u.5 for 7470091	ppo-u.5 for 7472992	ath-u.5 for YAB5	ath-u.5 for YAB2	bra-r.6 for 103836389	bra-r.6 for 103858348	vvi-u.5 for 100267536	vvi-u.5 for 100256505	vvi-u.5 for 100254328	ghi-r.1 for 107917100	ghi-r.1 for 107907328	ghi-r.1 for 107901565	bna-r.1 for 106346333	bna-r.1 for 106377031	bna-r.1 for 106414914	cit-r.1 for 102624359	cit-r.1 for 102611194	sly-u.5 for YABBY5a	sly-u.5 for YABBY2	sly-u.5 for YABBY2a	sot-r.1 for 102597616	sot-r.1 for 102605344	sot-r.1 for 102581691	nta-r.1 for 107763706	nta-r.1 for 107808962	nta-r.1 for 107785164	osa-u.5 for 4333584	osa-u.5 for 4342449	osa-u.5 for 4352818	zma-u.5 for 100272921	zma-u.5 for 100273901	zma-u.5 for 100283014	tae-r.2 for 100192178	tae-r.2 for 123122693	hvu-r.1 for 123452083	sbi-r.1 for 8071489	bdi-r.1 for 100827245	bdi-r.1 for 100826382	bdi-r.1 for 100837815

Ortholog

Ortholog ID: 1260

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

YAB5

YAB2

YABBY5a

YABBY2

YABBY5b

Function^*

protein YABBY 12

protein YABBY 9

protein YABBY 14