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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346730   solanesyl diphosphate synthase 2, chloroplastic 
 ath-u.5   SPS2   solanesyl diphosphate synthase 2 
 ath-u.5   SPS1   solanesyl diphosphate synthase 1 
 gma-u.5   100805842   solanesyl diphosphate synthase 1, chloroplastic 
 gma-u.5   100783538   solanesyl diphosphate synthase 1, chloroplastic 
 vvi-u.5   100246988   solanesyl diphosphate synthase 1, chloroplastic 
 ppo-u.5   7459128   solanesyl diphosphate synthase 1, chloroplastic 
 mtr-u.5   25487134   solanesyl diphosphate synthase 1, chloroplastic 
 sly-u.5   SppS   solanesyl diphosphate synthase 
 osa-u.5   4351957   probable solanesyl-diphosphate synthase 3, chloroplastic 
 osa-u.5   9267741   solanesyl-diphosphate synthase 2, chloroplastic 
 zma-u.5   100191875   Solanesyl diphosphate synthase 2 chloroplastic 
 zma-u.5   100282721   prenyl transferase 

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Top 50 coexpressed genes to 106346730 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346730 (bna-r.1 coexpression data)

CoexMap"106346730"


bnaLOC106346730 | Entrez gene ID : 106346730    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00900 [list] [network] Terpenoid backbone biosynthesis (170 genes)
GO BP
GO:0010236 [list] [network] plastoquinone biosynthetic process  (4 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (278 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (96 genes)  IEA  
Protein XP_013641601.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_013641601.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_013641601.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346730
ath-u.5
for
SPS2
ath-u.5
for
SPS1
gma-u.5
for
100805842
gma-u.5
for
100783538
vvi-u.5
for
100246988
ppo-u.5
for
7459128
mtr-u.5
for
25487134
sly-u.5
for
SppS
osa-u.5
for
4351957
osa-u.5
for
9267741
zma-u.5
for
100191875
zma-u.5
for
100282721


Ortholog ID: 7037
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi bdi bdi cre
Symbol LOC106354696 LOC106365558 LOC103832329 LOC103872491 SPS2 LOC107895305 LOC107920469 LOC102612772 LOC100783538 LOC100805842 LOC100246988 LOC7459128 LOC25487134 SppS LOC102593674 LOC107832641 LOC107765960 LOC9267741 LOC4351957 LOC100282721 LOC100191875 LOC123069734 LOC123183265 LOC123451941 LOC8155346 LOC100835146 LOC100826224 CHLRE_13g565650v5
Function* solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 2 solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase probable solanesyl-diphosphate synthase 3, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic solanesyl diphosphate synthase 2, chloroplastic-like solanesyl-diphosphate synthase 2, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic prenyl transferase Solanesyl diphosphate synthase 2 chloroplastic solanesyl-diphosphate synthase 2, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna04712 Circadian rhythm - plant 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna04120 Ubiquitin mediated proteolysis 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath00900 Terpenoid backbone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00750 Vitamin B6 metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta04146 Peroxisome 3
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta04146 Peroxisome 3
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01240 Biosynthesis of cofactors 3
osa00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa00260 Glycine, serine and threonine metabolism 3
osa00670 One carbon pool by folate 3
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00562 Inositol phosphate metabolism 3
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 3
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00740 Riboflavin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106354696 106365558 103832329 103872491 838275 107895305 107920469 102612772 100783538 100805842 100246988 7459128 25487134 101253007 102593674 107832641 107765960 9267741 4351957 100282721 100191875 123069734 123183265 123451941 8155346 100835146 100826224 5719046
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