ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106352572	silicon efflux transporter LSI2
bna-r.1	106374062	silicon efflux transporter LSI2-like
bra-r.6	103843766	silicon efflux transporter LSI2
ath-u.5	AT1G02260	Divalent ion symporter
ghi-r.1	107904609	silicon efflux transporter LSI2
ghi-r.1	107923483	silicon efflux transporter LSI2
cit-r.1	102627359	silicon efflux transporter LSI2-like
cit-r.1	102622728	silicon efflux transporter LSI2-like
gma-u.5	100791198	silicon efflux transporter LSI2-like
gma-u.5	100791733	silicon efflux transporter LSI3
gma-u.5	100792256	silicon efflux transporter LSI2
vvi-u.5	100259320	silicon efflux transporter LSI2
vvi-u.5	100243964	silicon efflux transporter LSI2
vvi-u.5	100242765	silicon efflux transporter LSI2
ppo-u.5	18103943	silicon efflux transporter LSI2
ppo-u.5	18106524	silicon efflux transporter LSI3
ppo-u.5	18106525	silicon efflux transporter LSI2
mtr-u.5	11444088	silicon efflux transporter LSI2
mtr-u.5	25496368	silicon efflux transporter LSI2
sly-u.5	101263323	silicon efflux transporter LSI2-like
sly-u.5	101259123	silicon efflux transporter LSI2-like
sot-r.1	102599999	putative transporter arsB
nta-r.1	107788992	silicon efflux transporter LSI2
nta-r.1	107762414	silicon efflux transporter LSI2
nta-r.1	107772594	silicon efflux transporter LSI2-like
osa-u.5	4331617	silicon efflux transporter LSI2-like
osa-u.5	4331184	silicon efflux transporter LSI2-like
osa-u.5	4348760	silicon efflux transporter LSI2-like
zma-u.5	100281495	uncharacterized LOC100281495
zma-u.5	100281732	arsenite transport subunit B
zma-u.5	100285151	uncharacterized LOC100285151
tae-r.2	123093503	silicon efflux transporter LSI3
tae-r.2	123098781	silicon efflux transporter LSI2
tae-r.2	123088141	silicon efflux transporter LSI3
hvu-r.1	123449706	silicon efflux transporter LSI2-like
hvu-r.1	123402924	silicon efflux transporter LSI2-like
hvu-r.1	123429935	silicon efflux transporter LSI2-like
sbi-r.1	8059699	putative transporter arsB
sbi-r.1	8071382	putative transporter arsB
sbi-r.1	110431862	putative transporter arsB
bdi-r.1	100841133	silicon efflux transporter LSI2
bdi-r.1	100827616	silicon efflux transporter LSI3
bdi-r.1	100845709	silicon efflux transporter LSI2

Top 50 coexpressed genes to 106352572 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106352572 (bna-r.1 coexpression data)

CoexMap"106352572"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport	(2900 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(5322 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(9970 genes)

IEA

GO MF

GO:0003677 [list] [network] DNA binding

(6522 genes)

IEA

Protein

XP_013647651.2 [sequence] [blastp]
XP_048597977.1 [sequence] [blastp]
XP_048597978.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, E.R. 1, vacu 1, golg 1, cyto_E.R. 1	(predict for XP_013647651.2)
plas 9, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_048597977.1)
plas 9, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_048597978.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_013647651.2)
scret 9	(predict for XP_048597977.1)
scret 9	(predict for XP_048597978.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106352572	bna-r.1 for 106374062	bra-r.6 for 103843766	ath-u.5 for AT1G02260	ghi-r.1 for 107904609	ghi-r.1 for 107923483	cit-r.1 for 102627359	cit-r.1 for 102622728	gma-u.5 for 100791198	gma-u.5 for 100791733	gma-u.5 for 100792256	vvi-u.5 for 100259320	vvi-u.5 for 100243964	vvi-u.5 for 100242765	ppo-u.5 for 18103943	ppo-u.5 for 18106524	ppo-u.5 for 18106525	mtr-u.5 for 11444088	mtr-u.5 for 25496368	sly-u.5 for 101263323	sly-u.5 for 101259123	sot-r.1 for 102599999	nta-r.1 for 107788992	nta-r.1 for 107762414	nta-r.1 for 107772594	osa-u.5 for 4331617	osa-u.5 for 4331184	osa-u.5 for 4348760	zma-u.5 for 100281495	zma-u.5 for 100281732	zma-u.5 for 100285151	tae-r.2 for 123093503	tae-r.2 for 123098781	tae-r.2 for 123088141	hvu-r.1 for 123449706	hvu-r.1 for 123402924	hvu-r.1 for 123429935	sbi-r.1 for 8059699	sbi-r.1 for 8071382	sbi-r.1 for 110431862	bdi-r.1 for 100841133	bdi-r.1 for 100827616	bdi-r.1 for 100845709

Ortholog

Ortholog ID: 2680

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*