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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G02260   Divalent ion symporter 
 ath-r.7   AT1G02260   Divalent ion symporter 
 ath-m.9   AT1G02260   Divalent ion symporter 
 ath-e.2   AT1G02260   Divalent ion symporter 
 ath-m.4.bio   AT1G02260   Divalent ion symporter 
 ath-m.4.hor   AT1G02260   Divalent ion symporter 
 ath-m.4.lig   AT1G02260   Divalent ion symporter 
 ath-m.4.str   AT1G02260   Divalent ion symporter 
 ath-m.4.tis   AT1G02260   Divalent ion symporter 
 bra-r.6   103843766   silicon efflux transporter LSI2 
 bna-r.1   106352572   silicon efflux transporter LSI2 
 bna-r.1   106374062   silicon efflux transporter LSI2-like 
 ghi-r.1   107923483   silicon efflux transporter LSI2 
 ghi-r.1   107904609   silicon efflux transporter LSI2 
 cit-r.1   102622728   silicon efflux transporter LSI2-like 
 cit-r.1   102627359   silicon efflux transporter LSI2-like 
 gma-u.5   100791733   silicon efflux transporter LSI3 
 gma-u.5   100791198   silicon efflux transporter LSI2-like 
 gma-u.5   100792256   silicon efflux transporter LSI2 
 vvi-u.5   100259320   silicon efflux transporter LSI2 
 vvi-u.5   100243964   silicon efflux transporter LSI2 
 vvi-u.5   100242765   silicon efflux transporter LSI2 
 ppo-u.5   7474059   silicon efflux transporter LSI2 
 ppo-u.5   18106524   silicon efflux transporter LSI3 
 ppo-u.5   18106525   silicon efflux transporter LSI2 
 mtr-u.5   25496368   silicon efflux transporter LSI2 
 mtr-u.5   11444088   silicon efflux transporter LSI2 
 sly-u.5   101259123   silicon efflux transporter LSI2-like 
 sly-u.5   101263323   silicon efflux transporter LSI2-like 
 sot-r.1   102599999   putative transporter arsB 
 nta-r.1   107762414   silicon efflux transporter LSI2 
 nta-r.1   107788992   silicon efflux transporter LSI2 
 nta-r.1   107772594   silicon efflux transporter LSI2-like 
 osa-u.5   4331184   silicon efflux transporter LSI2-like 
 osa-u.5   107279752   silicon efflux transporter LSI2-like 
 osa-u.5   4331617   silicon efflux transporter LSI2-like 
 zma-u.5   103626193   silicon efflux transporter LSI2 
 zma-u.5   100281495   uncharacterized LOC100281495 
 zma-u.5   100285151   uncharacterized LOC100285151 
 tae-r.2   123093503   silicon efflux transporter LSI3 
 tae-r.2   123088141   silicon efflux transporter LSI3 
 tae-r.2   123044359   silicon efflux transporter LSI2 
 hvu-r.1   123429935   silicon efflux transporter LSI2-like 
 hvu-r.1   123402924   silicon efflux transporter LSI2-like 
 hvu-r.1   123449706   silicon efflux transporter LSI2-like 
 sbi-r.1   8071382   putative transporter arsB 
 sbi-r.1   8059699   putative transporter arsB 
 sbi-r.1   110431862   putative transporter arsB 
 bdi-r.1   100845709   silicon efflux transporter LSI2 
 bdi-r.1   100841133   silicon efflux transporter LSI2 
 bdi-r.1   100827616   silicon efflux transporter LSI3 

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Top 50 coexpressed genes to AT1G02260 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G02260 (ath-u.5 coexpression data)

CoexMap"839344"


athAT1G02260 | Entrez gene ID : 839344      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 2 3 3 3 2 2 1 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0098849 [list] [network] cellular detoxification of cadmium ion  (3 genes)  IMP  
GO:0055085 [list] [network] transmembrane transport  (543 genes)  IGI  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO MF
GO:0015434 [list] [network] ABC-type cadmium transporter activity  (3 genes)  IGI  
Protein NP_001320653.1 [sequence] [blastp]
NP_171728.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for NP_001320653.1)
plas 8,  E.R. 1  (predict for NP_171728.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_001320653.1)
scret 9  (predict for NP_171728.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G02260
ath-r.7
for
AT1G02260
ath-m.9
for
AT1G02260
ath-e.2
for
AT1G02260
ath-m.4.bio
for
AT1G02260
ath-m.4.hor
for
AT1G02260
ath-m.4.lig
for
AT1G02260
ath-m.4.str
for
AT1G02260
ath-m.4.tis
for
AT1G02260
bra-r.6
for
103843766
bna-r.1
for
106352572
bna-r.1
for
106374062
ghi-r.1
for
107923483
ghi-r.1
for
107904609
cit-r.1
for
102622728
cit-r.1
for
102627359
gma-u.5
for
100791733
gma-u.5
for
100791198
gma-u.5
for
100792256
vvi-u.5
for
100259320
vvi-u.5
for
100243964
vvi-u.5
for
100242765
ppo-u.5
for
7474059
ppo-u.5
for
18106524
ppo-u.5
for
18106525
mtr-u.5
for
25496368
mtr-u.5
for
11444088
sly-u.5
for
101259123
sly-u.5
for
101263323
sot-r.1
for
102599999
nta-r.1
for
107762414
nta-r.1
for
107788992
nta-r.1
for
107772594
osa-u.5
for
4331184
osa-u.5
for
107279752
osa-u.5
for
4331617
zma-u.5
for
103626193
zma-u.5
for
100281495
zma-u.5
for
100285151
tae-r.2
for
123093503
tae-r.2
for
123088141
tae-r.2
for
123044359
hvu-r.1
for
123429935
hvu-r.1
for
123402924
hvu-r.1
for
123449706
sbi-r.1
for
8071382
sbi-r.1
for
8059699
sbi-r.1
for
110431862
bdi-r.1
for
100845709
bdi-r.1
for
100841133
bdi-r.1
for
100827616


Ortholog ID: 2680
Species ath bra bna bna ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol AT1G02260 LOC103843766 LOC106352572 LOC106374062 LOC107923483 LOC107904609 LOC102622728 LOC102627359 LOC100818695 LOC100819225 LOC100781849 LOC100259320 LOC100243964 LOC100242765 LOC7474059 LOC18106524 LOC18103943 LOC25496368 LOC11444088 LOC101259123 LOC101263323 LOC102599999 LOC107788992 LOC107772594 LOC107763867 LOC107279752 LOC4331617 LOC4348760 LOC103626193 LOC100281495 LOC100281732 LOC123088141 LOC123044359 LOC123119461 LOC123429935 LOC123402924 LOC123449706 LOC8071382 LOC8059699 LOC110431862 LOC100845709 LOC100841133 LOC100827616
Function* Divalent ion symporter silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2-like silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2 silicon efflux transporter LSI3 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI3 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like putative transporter arsB silicon efflux transporter LSI2 silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2 uncharacterized LOC100281495 arsenite transport subunit B silicon efflux transporter LSI3 silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like silicon efflux transporter LSI2-like putative transporter arsB putative transporter arsB putative transporter arsB silicon efflux transporter LSI2 silicon efflux transporter LSI2 silicon efflux transporter LSI3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04075 Plant hormone signal transduction 5
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 4
cit04075 Plant hormone signal transduction 4
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 7
ppo00195 Photosynthesis 5
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly04146 Peroxisome 2
sly04075 Plant hormone signal transduction 2
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 3
zma04626 Plant-pathogen interaction 3
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi01240 Biosynthesis of cofactors 2
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
sbi00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 4
sbi00561 Glycerolipid metabolism 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
bdi00941 Flavonoid biosynthesis 2
bdi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839344 103843766 106352572 106374062 107923483 107904609 102622728 102627359 100818695 100819225 100781849 100259320 100243964 100242765 7474059 18106524 18103943 25496368 11444088 101259123 101263323 102599999 107788992 107772594 107763867 107279752 4331617 4348760 103626193 100281495 100281732 123088141 123044359 123119461 123429935 123402924 123449706 8071382 8059699 110431862 100845709 100841133 100827616
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