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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106352779   probable ATP-dependent DNA helicase CHR12 
 bra-r.6   103849994   probable ATP-dependent DNA helicase CHR12 
 ath-u.5   ATCHR12   SNF2/Brahma-type chromatin-remodeling protein CHR12 
 ath-u.5   CHR23   homeotic protein regulator 
 ghi-r.1   107914887   probable ATP-dependent DNA helicase CHR12 
 ghi-r.1   107897690   probable ATP-dependent DNA helicase CHR12 
 cit-r.1   102614678   probable ATP-dependent DNA helicase CHR12 
 gma-u.5   100796912   probable ATP-dependent DNA helicase CHR12 
 gma-u.5   100786280   probable ATP-dependent DNA helicase CHR12 
 gma-u.5   100775993   probable ATP-dependent DNA helicase CHR12 
 vvi-u.5   100264840   probable ATP-dependent DNA helicase CHR12 
 ppo-u.5   7493684   probable ATP-dependent DNA helicase CHR12 
 ppo-u.5   7474225   probable ATP-dependent DNA helicase CHR12 
 mtr-u.5   11444205   probable ATP-dependent DNA helicase CHR12 
 mtr-u.5   11414682   probable ATP-dependent DNA helicase CHR12 
 sly-u.5   101248711   SWI/SNF2-type chromatin remodelling ATPase 
 sot-r.1   102580079   probable ATP-dependent DNA helicase CHR12 
 nta-r.1   107776074   putative ATP-dependent DNA helicase CHR12 
 nta-r.1   107761173   putative ATP-dependent DNA helicase CHR12 
 osa-u.5   4337784   probable ATP-dependent DNA helicase CHR719 
 zma-u.5   103647820   probable ATP-dependent DNA helicase CHR12 
 zma-u.5   100278915   uncharacterized LOC100278915 
 tae-r.2   123191041   probable ATP-dependent DNA helicase CHR719 
 tae-r.2   123180412   probable ATP-dependent DNA helicase CHR719 
 hvu-r.1   123424615   probable ATP-dependent DNA helicase CHR719 
 sbi-r.1   8069479   probable ATP-dependent DNA helicase CHR12 
 bdi-r.1   100843552   probable ATP-dependent DNA helicase CHR12 

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Top 50 coexpressed genes to 106352779 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106352779 (bna-r.1 coexpression data)

CoexMap"106352779"


bnaLOC106352779 | Entrez gene ID : 106352779    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 1 3 1 2 2 1 1 2 1 2 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (509 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (108 genes)  IEA  
GO:0042393 [list] [network] histone binding  (165 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013647864.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_013647864.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_013647864.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106352779
bra-r.6
for
103849994
ath-u.5
for
ATCHR12
ath-u.5
for
CHR23
ghi-r.1
for
107914887
ghi-r.1
for
107897690
cit-r.1
for
102614678
gma-u.5
for
100796912
gma-u.5
for
100786280
gma-u.5
for
100775993
vvi-u.5
for
100264840
ppo-u.5
for
7493684
ppo-u.5
for
7474225
mtr-u.5
for
11444205
mtr-u.5
for
11414682
sly-u.5
for
101248711
sot-r.1
for
102580079
nta-r.1
for
107776074
nta-r.1
for
107761173
osa-u.5
for
4337784
zma-u.5
for
103647820
zma-u.5
for
100278915
tae-r.2
for
123191041
tae-r.2
for
123180412
hvu-r.1
for
123424615
sbi-r.1
for
8069479
bdi-r.1
for
100843552


Ortholog ID: 8443
Species bna bra ath ath ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC106352779 LOC103849994 ATCHR12 CHR23 LOC107914887 LOC107897690 LOC102614678 LOC100796912 LOC100786280 LOC100775993 LOC100264840 LOC7493684 LOC7474225 LOC11444205 LOC11414682 LOC101248711 LOC102580079 LOC107776074 LOC107761173 LOC4337784 LOC103647820 LOC100278915 LOC123191041 LOC123180412 LOC123424615 LOC8069479 LOC100843552
Function* probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 SNF2/Brahma-type chromatin-remodeling protein CHR12 homeotic protein regulator probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 SWI/SNF2-type chromatin remodelling ATPase probable ATP-dependent DNA helicase CHR12 putative ATP-dependent DNA helicase CHR12 putative ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR12 uncharacterized LOC100278915 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106352779 103849994 819772 832051 107914887 107897690 102614678 100796912 100786280 100775993 100264840 7493684 7474225 11444205 11414682 101248711 102580079 107776074 107761173 4337784 103647820 100278915 123191041 123180412 123424615 8069479 100843552
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