ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT2G22720	SPT2 chromatin protein
gma-u.5	100819902	protein SPT2 homolog
gma-u.5	100776977	protein SPT2 homolog
vvi-u.5	100241361	protein spt2
ppo-u.5	7480195	protein spt2
ppo-u.5	7476436	uncharacterized LOC7476436
mtr-u.5	112422237	neurofilament heavy polypeptide
sly-u.5	101264295	uncharacterized LOC101264295
osa-u.5	4350317	uncharacterized LOC4350317
zma-u.5	103646089	trichohyalin
zma-u.5	103641991	uncharacterized LOC103641991

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly	(137 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(5322 genes)	IEA

GO CC

GO:0005730 [list] [network] nucleolus

(615 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(165 genes)	IEA
GO:0003677 [list] [network] DNA binding	(6522 genes)	IEA

Protein

XP_013653109.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_013653109.1)

Subcellular
localization
TargetP

other 5

(predict for XP_013653109.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G22720	gma-u.5 for 100819902	gma-u.5 for 100776977	vvi-u.5 for 100241361	ppo-u.5 for 7480195	ppo-u.5 for 7476436	mtr-u.5 for 112422237	sly-u.5 for 101264295	osa-u.5 for 4350317	zma-u.5 for 103646089	zma-u.5 for 103641991

Ortholog ID: 5063

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein SPT2 homolog

protein spt2

protein SPT2 homolog

protein spt2

SPT2 chromatin protein

protein SPT2 homolog

protein SPT2

protein SPT2 homolog

protein spt2

neurofilament heavy polypeptide

uncharacterized LOC101264295

eukaryotic translation initiation factor 3 subunit A

uncharacterized LOC102586524

uncharacterized LOC107801877

uncharacterized LOC107772257

uncharacterized LOC4350317

uncharacterized LOC103641991

trichohyalin

putative mediator of RNA polymerase II transcription subunit 12

putative uncharacterized protein DDB_G0271606

trichohyalin

protein SPT2 homolog

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	5
bra03015	mRNA surveillance pathway	3
bra04016	MAPK signaling pathway - plant	2
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03250	Viral life cycle - HIV-1	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae03250	Viral life cycle - HIV-1	3
tae04016	MAPK signaling pathway - plant	2
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

106371330

106392114

103864381

103842470

816802

107935265

107950504

102629424

100776977

100819902

100241361

7480195

112422237

101264295

102580481

102586524

107801877

107772257

4350317

103641991

103646089

123136165

123132138

123401336

8055984

100835931

5726736

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G22720 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G22720 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G22720 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G22720 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**