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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106446442   protein SPT2 homolog 
 bna-r.1   106415603   protein SPT2 homolog 
 bna-r.1   106392114   protein spt2 
 bra-r.6   103864381   protein SPT2 homolog 
 bra-r.6   103842470   protein spt2 
 ath-u.5   AT2G22720   SPT2 chromatin protein 
 ghi-r.1   107935265   protein SPT2 homolog 
 ghi-r.1   107950504   protein SPT2 homolog 
 cit-r.1   102629424   protein SPT2 
 gma-u.5   100819902   protein SPT2 homolog 
 gma-u.5   100776977   protein SPT2 homolog 
 vvi-u.5   100241361   protein spt2 
 ppo-u.5   7480195   protein spt2 
 ppo-u.5   7476436   uncharacterized LOC7476436 
 mtr-u.5   112422237   neurofilament heavy polypeptide 
 sly-u.5   101264295   uncharacterized LOC101264295 
 sot-r.1   102586524   uncharacterized LOC102586524 
 sot-r.1   102580481   eukaryotic translation initiation factor 3 subunit A 
 nta-r.1   107829979   uncharacterized LOC107829979 
 nta-r.1   107801877   uncharacterized LOC107801877 
 nta-r.1   107779433   uncharacterized LOC107779433 
 osa-u.5   4350317   uncharacterized LOC4350317 
 zma-u.5   103646089   trichohyalin 
 zma-u.5   103641991   uncharacterized LOC103641991 
 tae-r.2   123143675   RNA polymerase II degradation factor 1 
 tae-r.2   123132138   putative uncharacterized protein DDB_G0271606 
 tae-r.2   123136165   putative mediator of RNA polymerase II transcription subunit 12 
 hvu-r.1   123401336   trichohyalin 
 sbi-r.1   8055984   protein SPT2 homolog 
 bdi-r.1   100835931   protein SPT2 homolog 
 cre-r.1   CHLRE_02g095104v5   uncharacterized protein 

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Top 50 coexpressed genes to 106446442 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106446442 (bna-r.1 coexpression data)

CoexMap"106446442"


bnaLOC106446442 | Entrez gene ID : 106446442    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 2 1 2 1 1 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006334 [list] [network] nucleosome assembly  (137 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (165 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013743626.2 [sequence] [blastp]
XP_048633595.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013743626.2)
chlo 6,  nucl 4  (predict for XP_048633595.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013743626.2)
other 3  (predict for XP_048633595.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106446442
bna-r.1
for
106415603
bna-r.1
for
106392114
bra-r.6
for
103864381
bra-r.6
for
103842470
ath-u.5
for
AT2G22720
ghi-r.1
for
107935265
ghi-r.1
for
107950504
cit-r.1
for
102629424
gma-u.5
for
100819902
gma-u.5
for
100776977
vvi-u.5
for
100241361
ppo-u.5
for
7480195
ppo-u.5
for
7476436
mtr-u.5
for
112422237
sly-u.5
for
101264295
sot-r.1
for
102586524
sot-r.1
for
102580481
nta-r.1
for
107829979
nta-r.1
for
107801877
nta-r.1
for
107779433
osa-u.5
for
4350317
zma-u.5
for
103646089
zma-u.5
for
103641991
tae-r.2
for
123143675
tae-r.2
for
123132138
tae-r.2
for
123136165
hvu-r.1
for
123401336
sbi-r.1
for
8055984
bdi-r.1
for
100835931
cre-r.1
for
CHLRE_02g095104v5


Ortholog ID: 5063
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106446442 LOC106392114 LOC106371330 LOC103864381 LOC103842470 AT2G22720 LOC107935265 LOC107950504 LOC102629424 LOC100819902 LOC100776977 LOC100241361 LOC7480195 LOC7476436 LOC112422237 LOC101264295 LOC102586524 LOC102580481 LOC107801877 LOC107779433 LOC107772257 LOC4350317 LOC103646089 LOC103641991 LOC123143675 LOC123132138 LOC123136165 LOC123401336 LOC8055984 LOC100835931 CHLRE_02g095104v5
Function* protein SPT2 homolog protein spt2 protein SPT2 homolog protein SPT2 homolog protein spt2 SPT2 chromatin protein protein SPT2 homolog protein SPT2 homolog protein SPT2 protein SPT2 homolog protein SPT2 homolog protein spt2 protein spt2 uncharacterized LOC7476436 neurofilament heavy polypeptide uncharacterized LOC101264295 uncharacterized LOC102586524 eukaryotic translation initiation factor 3 subunit A uncharacterized LOC107801877 uncharacterized LOC107779433 uncharacterized LOC107772257 uncharacterized LOC4350317 trichohyalin uncharacterized LOC103641991 RNA polymerase II degradation factor 1 putative uncharacterized protein DDB_G0271606 putative mediator of RNA polymerase II transcription subunit 12 trichohyalin protein SPT2 homolog protein SPT2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03015 mRNA surveillance pathway 3
bra04016 MAPK signaling pathway - plant 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03250 Viral life cycle - HIV-1 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae04016 MAPK signaling pathway - plant 2
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106446442 106392114 106371330 103864381 103842470 816802 107935265 107950504 102629424 100819902 100776977 100241361 7480195 7476436 112422237 101264295 102586524 102580481 107801877 107779433 107772257 4350317 103646089 103641991 123143675 123132138 123136165 123401336 8055984 100835931 5726736
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