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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106358134   mediator of RNA polymerase II transcription subunit 23 
 bna-r.1   106371254   mediator of RNA polymerase II transcription subunit 23 
 bna-r.1   106440989   mediator of RNA polymerase II transcription subunit 23 
 bna-r.1   106398585   mediator of RNA polymerase II transcription subunit 23 
 bra-r.6   103840785   mediator of RNA polymerase II transcription subunit 23 
 bra-r.6   103829279   mediator of RNA polymerase II transcription subunit 23 
 ath-u.5   AT1G23230   mediator of RNA polymerase II transcription subunit 
 ghi-r.1   107909886   mediator of RNA polymerase II transcription subunit 23 
 ghi-r.1   107886275   mediator of RNA polymerase II transcription subunit 23 
 cit-r.1   102623116   mediator of RNA polymerase II transcription subunit 23 
 gma-u.5   100798789   mediator of RNA polymerase II transcription subunit 23 
 vvi-u.5   100262719   mediator of RNA polymerase II transcription subunit 23 
 ppo-u.5   7482905   mediator of RNA polymerase II transcription subunit 23 
 mtr-u.5   25482512   mediator of RNA polymerase II transcription subunit 23 
 sly-u.5   101257965   mediator of RNA polymerase II transcription subunit 23 
 sot-r.1   102586283   mediator of RNA polymerase II transcription subunit 23 
 nta-r.1   107760529   mediator of RNA polymerase II transcription subunit 23 
 osa-u.5   4330633   mediator of RNA polymerase II transcription subunit 23 
 zma-u.5   100384269   uncharacterized LOC100384269 
 tae-r.2   123145406   mediator of RNA polymerase II transcription subunit 23 
 tae-r.2   123138150   mediator of RNA polymerase II transcription subunit 23 
 tae-r.2   123128297   mediator of RNA polymerase II transcription subunit 23 
 hvu-r.1   123402428   mediator of RNA polymerase II transcription subunit 23 
 sbi-r.1   8077684   mediator of RNA polymerase II transcription subunit 23 
 bdi-r.1   100841446   mediator of RNA polymerase II transcription subunit 23 

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Top 50 coexpressed genes to 106358134 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106358134 (bna-r.1 coexpression data)

CoexMap"106358134"


bnaLOC106358134 | Entrez gene ID : 106358134    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 1 1 1 1 1 1 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010628 [list] [network] positive regulation of gene expression  (109 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO:0005667 [list] [network] transcription regulator complex  (441 genes)  IEA  
GO MF
Protein XP_048592705.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_048592705.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_048592705.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106358134
bna-r.1
for
106371254
bna-r.1
for
106440989
bna-r.1
for
106398585
bra-r.6
for
103840785
bra-r.6
for
103829279
ath-u.5
for
AT1G23230
ghi-r.1
for
107909886
ghi-r.1
for
107886275
cit-r.1
for
102623116
gma-u.5
for
100798789
vvi-u.5
for
100262719
ppo-u.5
for
7482905
mtr-u.5
for
25482512
sly-u.5
for
101257965
sot-r.1
for
102586283
nta-r.1
for
107760529
osa-u.5
for
4330633
zma-u.5
for
100384269
tae-r.2
for
123145406
tae-r.2
for
123138150
tae-r.2
for
123128297
hvu-r.1
for
123402428
sbi-r.1
for
8077684
bdi-r.1
for
100841446


Ortholog ID: 10473
Species bna bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106358134 LOC106440989 LOC106398585 LOC103840785 LOC103829279 AT1G23230 LOC107909886 LOC107886275 LOC102623116 LOC100798789 LOC100262719 LOC7482905 LOC25482512 LOC101257965 LOC102586283 LOC107760529 LOC4330633 LOC100384269 LOC123145406 LOC123138150 LOC123128297 LOC123402428 LOC8077684 LOC100841446
Function* mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 uncharacterized LOC100384269 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23 mediator of RNA polymerase II transcription subunit 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04136 Autophagy - other 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 6
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106358134 106440989 106398585 103840785 103829279 838932 107909886 107886275 102623116 100798789 100262719 7482905 25482512 101257965 102586283 107760529 4330633 100384269 123145406 123138150 123128297 123402428 8077684 100841446
The preparation time of this page was 3.6 [sec].