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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G40240   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G56030   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100776103   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 
 vvi-u.5   104881091   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ppo-u.5   7457834   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 sly-u.5   101255279   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 

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Top 50 coexpressed genes to AT2G40240 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G40240 (ath-u.5 coexpression data)

CoexMap"106360815"


bnaLOC106360815 | Entrez gene ID : 106360815    
Species ath gma vvi ppo sly nta bna osa tae bdi sot bra sbi hvu cit zma cre ghi mtr
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013655939.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_013655939.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_013655939.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT2G40240

.
ath-u.5
for
AT3G56030

.
gma-u.5
for
100776103

.
vvi-u.5
for
104881091

.
ppo-u.5
for
7457834

.
sly-u.5
for
101255279

.


Ortholog ID: 13424
Species ath ath gma sly vvi ppo ghi ghi sot cit nta nta
Symbol AT2G40240 AT3G56030 LOC100776103 LOC101255279 LOC104881091 LOC7457834 LOC107903364 LOC121230774 LOC102606121 LOC107178029 LOC107828542 LOC107762812
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030 pentatricopeptide repeat-containing protein At3g56030, mitochondrial-like pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818616 824769 100776103 101255279 104881091 7457834 107903364 121230774 102606121 107178029 107828542 107762812
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