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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107762812   pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like 
 nta-r.1   107828542   pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like 
 sly-u.5   101255279   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 
 sot-r.1   102606121   pentatricopeptide repeat-containing protein At3g56030 
 ath-u.5   AT2G40240   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G56030   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100776103   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 
 vvi-u.5   104881091   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ppo-u.5   7457834   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ghi-r.1   107903364   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ghi-r.1   121230774   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 cit-r.1   107178029   pentatricopeptide repeat-containing protein At3g56030, mitochondrial-like 

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Top 50 coexpressed genes to 107762812 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107762812 (nta-r.1 coexpression data)

CoexMap"107762812"


ntaLOC107762812 | Entrez gene ID : 107762812      
Species nta sly sot ath gma vvi ppo ghi cit cre bra hvu mtr bna tae bdi osa zma sbi
Paralog 2 1 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016436692.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016436692.2)
Subcellular
localization
TargetP
scret 7  (predict for XP_016436692.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107762812
nta-r.1
for
107828542
sly-u.5
for
101255279
sot-r.1
for
102606121
ath-u.5
for
AT2G40240
ath-u.5
for
AT3G56030
gma-u.5
for
100776103
vvi-u.5
for
104881091
ppo-u.5
for
7457834
ghi-r.1
for
107903364
ghi-r.1
for
121230774
cit-r.1
for
107178029


Ortholog ID: 13424
Species nta nta sly sot ath ath gma vvi ppo ghi ghi cit
Symbol LOC107762812 LOC107828542 LOC101255279 LOC102606121 AT2G40240 AT3G56030 LOC100776103 LOC104881091 LOC7457834 LOC107903364 LOC121230774 LOC107178029
Function* pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At3g56030 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107762812 107828542 101255279 102606121 818616 824769 100776103 104881091 7457834 107903364 121230774 107178029
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