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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106361691   nonsense-mediated mRNA decay factor SMG7-like 
 bna-r.1   106382169   nonsense-mediated mRNA decay factor SMG7-like 
 bna-r.1   106389626   nonsense-mediated mRNA decay factor SMG7-like 
 bna-r.1   106418568   nonsense-mediated mRNA decay factor SMG7-like 
 bra-r.6   103835338   protein SMG7L 
 bra-r.6   103838972   protein SMG7L 
 ath-u.5   AT5G02650   uncharacterized protein 
 ath-u.5   AT1G28260   Telomerase activating protein Est1 
 ghi-r.1   107901801   protein SMG7L 
 ghi-r.1   107962170   protein SMG7L 
 cit-r.1   102621058   nonsense-mediated mRNA decay factor SMG7-like 
 gma-u.5   100815470   protein SMG7L 
 gma-u.5   100789202   protein SMG7L 
 gma-u.5   100786043   protein SMG7L 
 vvi-u.5   104878439   nonsense-mediated mRNA decay factor SMG7-like 
 ppo-u.5   18103036   nonsense-mediated mRNA decay factor SMG7-like 
 ppo-u.5   7477396   nonsense-mediated mRNA decay factor SMG7-like 
 mtr-u.5   11439284   protein SMG7L 
 sly-u.5   101254445   nonsense-mediated mRNA decay factor SMG7-like 
 sot-r.1   102586480   protein SMG7L 
 nta-r.1   107766421   nonsense-mediated mRNA decay factor SMG7-like 
 nta-r.1   107821190   nonsense-mediated mRNA decay factor SMG7-like 

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Top 50 coexpressed genes to 106361691 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106361691 (bna-r.1 coexpression data)

CoexMap"106361691"


bnaLOC106361691 | Entrez gene ID : 106361691    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa bdi tae zma sbi hvu cre
Paralog 4 2 2 2 1 3 1 2 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (41 genes)  IEA  
GO CC
GO:0005697 [list] [network] telomerase holoenzyme complex  (17 genes)  IEA  
GO MF
GO:0070034 [list] [network] telomerase RNA binding  (17 genes)  IEA  
GO:0042162 [list] [network] telomeric DNA binding  (176 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013656947.1 [sequence] [blastp]
XP_013656948.1 [sequence] [blastp]
XP_013656949.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_013656947.1)
nucl 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_013656948.1)
nucl 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_013656949.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_013656947.1)
other 8,  chlo 4  (predict for XP_013656948.1)
other 8,  chlo 4  (predict for XP_013656949.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106361691
bna-r.1
for
106382169
bna-r.1
for
106389626
bna-r.1
for
106418568
bra-r.6
for
103835338
bra-r.6
for
103838972
ath-u.5
for
AT5G02650
ath-u.5
for
AT1G28260
ghi-r.1
for
107901801
ghi-r.1
for
107962170
cit-r.1
for
102621058
gma-u.5
for
100815470
gma-u.5
for
100789202
gma-u.5
for
100786043
vvi-u.5
for
104878439
ppo-u.5
for
18103036
ppo-u.5
for
7477396
mtr-u.5
for
11439284
sly-u.5
for
101254445
sot-r.1
for
102586480
nta-r.1
for
107766421
nta-r.1
for
107821190


Ortholog ID: 11412
Species bna bna bna bra bra ath ath ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta
Symbol LOC106361691 LOC106382169 LOC106389626 LOC103835338 LOC103838972 AT5G02650 AT1G28260 LOC107901801 LOC107962170 LOC102621058 LOC100815470 LOC100786043 LOC100783891 LOC104878439 LOC18103036 LOC7477396 LOC11439284 LOC101254445 LOC102586480 LOC107766421 LOC107821190
Function* nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like protein SMG7L protein SMG7L uncharacterized protein Telomerase activating protein Est1 protein SMG7L protein SMG7L nonsense-mediated mRNA decay factor SMG7-like protein SMG7L protein SMG7L protein SMG7L nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like protein SMG7L nonsense-mediated mRNA decay factor SMG7-like protein SMG7L nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 4
bna04136 Autophagy - other 4
bna00500 Starch and sucrose metabolism 2
bna00410 beta-Alanine metabolism 2
bna00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 6
bra01200 Carbon metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00640 Propanoate metabolism 3
bra00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00310 Lysine degradation 3
ath00640 Propanoate metabolism 2
ath00785 Lipoic acid metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 6
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106361691 106382169 106389626 103835338 103838972 831848 839720 107901801 107962170 102621058 100815470 100786043 100783891 104878439 18103036 7477396 11439284 101254445 102586480 107766421 107821190
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