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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G24730   mRNA splicing factor, thioredoxin-like U5 snRNP 
 gma-u.5   100306486   uncharacterized LOC100306486 
 vvi-u.5   100240847   uncharacterized LOC100240847 
 ppo-u.5   7470775   uncharacterized LOC7470775 
 mtr-u.5   25484638   thioredoxin-like protein 4B 
 mtr-u.5   120577112   thioredoxin-like protein 4B 
 sly-u.5   101244595   thioredoxin-like superfamily protein 
 osa-u.5   4350321   uncharacterized LOC4350321 
 zma-u.5   100280892   thioredoxin-like protein 4B 

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Top 50 coexpressed genes to AT3G24730 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G24730 (ath-u.5 coexpression data)

CoexMap"106361793"


bnaLOC106361793 | Entrez gene ID : 106361793    
Species ath gma vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0005682 [list] [network] U5 snRNP  (56 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (91 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (506 genes)  IEA  
GO MF
Protein XP_013657048.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  E.R. 1  (predict for XP_013657048.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013657048.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT3G24730
gma-u.5
for
100306486
vvi-u.5
for
100240847
ppo-u.5
for
7470775
mtr-u.5
for
25484638
mtr-u.5
for
120577112
sly-u.5
for
101244595
osa-u.5
for
4350321
zma-u.5
for
100280892


Ortholog ID: 11323
Species bra ath ghi ghi cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103860253 AT3G24730 LOC121213779 LOC107916781 LOC102626806 LOC100306486 LOC100240847 LOC7470775 LOC120577112 LOC25484638 LOC101244595 LOC102603634 LOC107786868 LOC107787993 LOC4350321 LOC100280892 LOC123096097 LOC123086885 LOC123447749 LOC8079205 LOC100835883
Function* thioredoxin-like protein 4B mRNA splicing factor, thioredoxin-like U5 snRNP thioredoxin-like protein 4B thioredoxin-like protein 4B uncharacterized LOC102626806 uncharacterized LOC100306486 uncharacterized LOC100240847 uncharacterized LOC7470775 thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like superfamily protein thioredoxin-like protein 4B uncharacterized LOC107786868 uncharacterized LOC107787993 uncharacterized LOC4350321 thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04144 Endocytosis 3
tae04814 Motor proteins 3
tae04820 Cytoskeleton in muscle cells 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103860253 822071 121213779 107916781 102626806 100306486 100240847 7470775 120577112 25484638 101244595 102603634 107786868 107787993 4350321 100280892 123096097 123086885 123447749 8079205 100835883
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