ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106361831	suppressor of disruption of TFIIS
bna-r.1	BNACNNG03600D	uncharacterized protein C24B11.05
bna-r.1	BNAANNG00280D	uncharacterized protein C24B11.05
bna-r.1	106420398	uncharacterized protein C24B11.05-like
bra-r.6	103867663	uncharacterized protein C24B11.05
bra-r.6	103851576	suppressor of disruption of TFIIS
bra-r.6	103856631	uncharacterized protein C24B11.05
ath-u.5	AT5G59490	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
ath-u.5	AT2G32150	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
ath-u.5	AT3G62040	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
ghi-r.1	107898835	uncharacterized LOC107898835
ghi-r.1	107885981	uncharacterized protein C24B11.05
ghi-r.1	107932460	uncharacterized protein C24B11.05
cit-r.1	112499289	uncharacterized LOC112499289
cit-r.1	102610855	hypothetical protein
cit-r.1	102624821	hypothetical protein
gma-u.5	100787007	uncharacterized LOC100787007
gma-u.5	100819459	uncharacterized LOC100819459
gma-u.5	100814291	uncharacterized LOC100814291
vvi-u.5	100263185	uncharacterized LOC100263185
vvi-u.5	100257326	uncharacterized protein C24B11.05
vvi-u.5	100245055	uncharacterized protein C24B11.05
ppo-u.5	7455382	uncharacterized protein C24B11.05
ppo-u.5	7465100	uncharacterized protein C24B11.05
ppo-u.5	7454933	uncharacterized LOC7454933
mtr-u.5	25491589	suppressor of disruption of TFIIS
mtr-u.5	25498498	uncharacterized LOC25498498
sly-u.5	101246255	uncharacterized protein C24B11.05
sly-u.5	101251614	haloacid dehalogenase-like hydrolase superfamily protein
sly-u.5	101251913	suppressor of disruption of TFIIS
sot-r.1	102595274	uncharacterized LOC102595274
sot-r.1	102599715	uncharacterized protein C24B11.05-like
sot-r.1	102599760	suppressor of disruption of TFIIS
nta-r.1	107793790	uncharacterized protein C24B11.05
nta-r.1	107806273	uncharacterized protein C24B11.05
nta-r.1	107808571	uncharacterized protein C24B11.05
osa-u.5	9266306	uncharacterized protein C24B11.05
osa-u.5	4344018	uncharacterized protein C24B11.05
osa-u.5	4333827	uncharacterized protein C24B11.05
zma-u.5	100273259	uncharacterized LOC100273259
zma-u.5	100284091	uncharacterized LOC100284091
zma-u.5	100283872	uncharacterized LOC100283872
tae-r.2	123051952	suppressor of disruption of TFIIS
tae-r.2	123081002	suppressor of disruption of TFIIS
tae-r.2	123044079	suppressor of disruption of TFIIS
hvu-r.1	123447322	suppressor of disruption of TFIIS-like
hvu-r.1	123425148	uncharacterized LOC123425148
hvu-r.1	123449024	phosphate metabolism protein 8-like
sbi-r.1	8081509	uncharacterized LOC8081509
sbi-r.1	8079688	uncharacterized LOC8079688
sbi-r.1	8078057	uncharacterized protein C24B11.05
bdi-r.1	100831886	phosphate metabolism protein 8
bdi-r.1	100821281	uncharacterized LOC100821281
bdi-r.1	100834392	suppressor of disruption of TFIIS
cre-r.1	CHLRE_12g524700v5	uncharacterized protein

Top 50 coexpressed genes to 106361831 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106361831 (bna-r.1 coexpression data)

CoexMap"106361831"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013657092.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, cysk 1, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1, cysk_plas 1

(predict for XP_013657092.1)

Subcellular
localization
TargetP

other 8, scret 3

(predict for XP_013657092.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106361831	bna-r.1 for BNACNNG03600D	bna-r.1 for BNAANNG00280D	bna-r.1 for 106420398	bra-r.6 for 103867663	bra-r.6 for 103851576	bra-r.6 for 103856631	ath-u.5 for AT5G59490	ath-u.5 for AT2G32150	ath-u.5 for AT3G62040	ghi-r.1 for 107898835	ghi-r.1 for 107885981	ghi-r.1 for 107932460	cit-r.1 for 112499289	cit-r.1 for 102610855	cit-r.1 for 102624821	gma-u.5 for 100787007	gma-u.5 for 100819459	gma-u.5 for 100814291	vvi-u.5 for 100263185	vvi-u.5 for 100257326	vvi-u.5 for 100245055	ppo-u.5 for 7455382	ppo-u.5 for 7465100	ppo-u.5 for 7454933	mtr-u.5 for 25491589	mtr-u.5 for 25498498	sly-u.5 for 101246255	sly-u.5 for 101251614	sly-u.5 for 101251913	sot-r.1 for 102595274	sot-r.1 for 102599715	sot-r.1 for 102599760	nta-r.1 for 107793790	nta-r.1 for 107806273	nta-r.1 for 107808571	osa-u.5 for 9266306	osa-u.5 for 4344018	osa-u.5 for 4333827	zma-u.5 for 100273259	zma-u.5 for 100284091	zma-u.5 for 100283872	tae-r.2 for 123051952	tae-r.2 for 123081002	tae-r.2 for 123044079	hvu-r.1 for 123447322	hvu-r.1 for 123425148	hvu-r.1 for 123449024	sbi-r.1 for 8081509	sbi-r.1 for 8079688	sbi-r.1 for 8078057	bdi-r.1 for 100831886	bdi-r.1 for 100821281	bdi-r.1 for 100834392	cre-r.1 for CHLRE_12g524700v5

Ortholog

Ortholog ID: 430

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized protein C24B11.05

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS

uncharacterized LOC112499289

hypothetical protein

phosphate metabolism protein 8

uncharacterized LOC100819459

uncharacterized LOC100790020

uncharacterized protein C24B11.05

uncharacterized LOC100263185

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS

uncharacterized LOC25498498

uncharacterized protein C24B11.05

haloacid dehalogenase-like hydrolase superfamily protein

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05-like

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

uncharacterized LOC100273259

uncharacterized LOC100284091

uncharacterized LOC100283697

suppressor of disruption of TFIIS

phosphate metabolism protein 8

suppressor of disruption of TFIIS-like

uncharacterized protein C24B11.05-like

suppressor of disruption of TFIIS-like

uncharacterized LOC8079688

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS-like

uncharacterized LOC100821281

suppressor of disruption of TFIIS

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	3
bra04075	Plant hormone signal transduction	2
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00053	Ascorbate and aldarate metabolism	2
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	7
bra00630	Glyoxylate and dicarboxylate metabolism	6
bra00380	Tryptophan metabolism	3
bra04016	MAPK signaling pathway - plant	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	5
ath01210	2-Oxocarboxylic acid metabolism	3
ath04075	Plant hormone signal transduction	3
ath00640	Propanoate metabolism	2
ath00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	2
ghi00270	Cysteine and methionine metabolism	2
ghi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03040	Spliceosome	2
cit04144	Endocytosis	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	4
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00020	Citrate cycle (TCA cycle)	3
sly01200	Carbon metabolism	3
sly00190	Oxidative phosphorylation	2
sly00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00900	Terpenoid backbone biosynthesis	2
nta04144	Endocytosis	2
nta04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3
osa00280	Valine, leucine and isoleucine degradation	3
osa00640	Propanoate metabolism	2
osa00785	Lipoic acid metabolism	2
osa01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	4
tae00480	Glutathione metabolism	4
tae01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	4
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
hvu00940	Phenylpropanoid biosynthesis	2
hvu00941	Flavonoid biosynthesis	2
hvu00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00040	Pentose and glucuronate interconversions	3
bdi01240	Biosynthesis of cofactors	3
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00053	Ascorbate and aldarate metabolism	2
bdi00561	Glycerolipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106394733

106436128

106387058

103867663

103867173

103847468

817774

825377

831784

107932460

107940890

107950139

112499289

102624821

102622497

100819459

100790020

100775435

100263185

100257326

100245055

7465100

7474215

7478826

25491589

25498498

11414016

101246255

101251614

101251913

102599715

102599760

107806273

107808571

107792716

9266306

4333827

4332401

100273259

100284091

100283697

123081002

123097912

123447322

123441171

123447319

8079688

8063526

110431237

100821281

100834392

5722514

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Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	2	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106361831 (bna-r.1 coexpression data)

Top 50 enrichment test to 106361831 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**