ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123051952	suppressor of disruption of TFIIS
tae-r.2	123044079	suppressor of disruption of TFIIS
tae-r.2	123085441	phosphate metabolism protein 8
tae-r.2	123063691	uncharacterized protein C24B11.05
hvu-r.1	123447322	suppressor of disruption of TFIIS-like
hvu-r.1	123425148	uncharacterized LOC123425148
hvu-r.1	123449024	phosphate metabolism protein 8-like
bdi-r.1	100821281	uncharacterized LOC100821281
bdi-r.1	100831886	phosphate metabolism protein 8
bdi-r.1	100834392	suppressor of disruption of TFIIS
osa-u.5	9266306	uncharacterized protein C24B11.05
osa-u.5	4344018	uncharacterized protein C24B11.05
osa-u.5	4333827	uncharacterized protein C24B11.05
zma-u.5	100273259	uncharacterized LOC100273259
zma-u.5	100284091	uncharacterized LOC100284091
zma-u.5	100283872	uncharacterized LOC100283872
sbi-r.1	8063526	uncharacterized protein C24B11.05
sbi-r.1	8078057	uncharacterized protein C24B11.05
sbi-r.1	8079688	uncharacterized LOC8079688
ath-u.5	AT5G59490	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
ath-u.5	AT2G32150	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
ath-u.5	AT3G62040	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
gma-u.5	100787007	uncharacterized LOC100787007
gma-u.5	100819459	uncharacterized LOC100819459
gma-u.5	100814291	uncharacterized LOC100814291
sly-u.5	101246255	uncharacterized protein C24B11.05
sly-u.5	101251614	haloacid dehalogenase-like hydrolase superfamily protein
sly-u.5	101251913	suppressor of disruption of TFIIS
bra-r.6	103867173	uncharacterized protein C24B11.05
bra-r.6	103850440	uncharacterized protein C24B11.05
bra-r.6	103851576	suppressor of disruption of TFIIS
vvi-u.5	100263185	uncharacterized LOC100263185
vvi-u.5	100257326	uncharacterized protein C24B11.05
vvi-u.5	100245055	uncharacterized protein C24B11.05
ppo-u.5	7474215	uncharacterized protein C24B11.05
ppo-u.5	7465100	uncharacterized protein C24B11.05
ppo-u.5	7455382	uncharacterized protein C24B11.05
mtr-u.5	25491589	suppressor of disruption of TFIIS
mtr-u.5	25498498	uncharacterized LOC25498498
ghi-r.1	107885981	uncharacterized protein C24B11.05
ghi-r.1	107899315	uncharacterized LOC107899315
ghi-r.1	107885979	suppressor of disruption of TFIIS
bna-r.1	106436128	uncharacterized protein C24B11.05
bna-r.1	106420402	suppressor of disruption of TFIIS-like
bna-r.1	106361831	suppressor of disruption of TFIIS
sot-r.1	102595274	uncharacterized LOC102595274
sot-r.1	102599715	uncharacterized protein C24B11.05-like
sot-r.1	102599760	suppressor of disruption of TFIIS
cit-r.1	102610855	hypothetical protein
cit-r.1	102624821	hypothetical protein
cit-r.1	102613181	uncharacterized LOC102613181
nta-r.1	107783373	uncharacterized protein C24B11.05
nta-r.1	107792716	suppressor of disruption of TFIIS
nta-r.1	107793790	uncharacterized protein C24B11.05
cre-r.1	CHLRE_12g524700v5	uncharacterized protein

Top 50 coexpressed genes to 123051952 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123051952 (tae-r.2 coexpression data)

CoexMap"123051952"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044330902.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, cyto_E.R. 4, vacu 1, cysk 1

(predict for XP_044330902.1)

Subcellular
localization
TargetP

other 7, scret 6

(predict for XP_044330902.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123051952	tae-r.2 for 123044079	tae-r.2 for 123085441	tae-r.2 for 123063691	hvu-r.1 for 123447322	hvu-r.1 for 123425148	hvu-r.1 for 123449024	bdi-r.1 for 100821281	bdi-r.1 for 100831886	bdi-r.1 for 100834392	osa-u.5 for 9266306	osa-u.5 for 4344018	osa-u.5 for 4333827	zma-u.5 for 100273259	zma-u.5 for 100284091	zma-u.5 for 100283872	sbi-r.1 for 8063526	sbi-r.1 for 8078057	sbi-r.1 for 8079688	ath-u.5 for AT5G59490	ath-u.5 for AT2G32150	ath-u.5 for AT3G62040	gma-u.5 for 100787007	gma-u.5 for 100819459	gma-u.5 for 100814291	sly-u.5 for 101246255	sly-u.5 for 101251614	sly-u.5 for 101251913	bra-r.6 for 103867173	bra-r.6 for 103850440	bra-r.6 for 103851576	vvi-u.5 for 100263185	vvi-u.5 for 100257326	vvi-u.5 for 100245055	ppo-u.5 for 7474215	ppo-u.5 for 7465100	ppo-u.5 for 7455382	mtr-u.5 for 25491589	mtr-u.5 for 25498498	ghi-r.1 for 107885981	ghi-r.1 for 107899315	ghi-r.1 for 107885979	bna-r.1 for 106436128	bna-r.1 for 106420402	bna-r.1 for 106361831	sot-r.1 for 102595274	sot-r.1 for 102599715	sot-r.1 for 102599760	cit-r.1 for 102610855	cit-r.1 for 102624821	cit-r.1 for 102613181	nta-r.1 for 107783373	nta-r.1 for 107792716	nta-r.1 for 107793790	cre-r.1 for CHLRE_12g524700v5

Ortholog

Ortholog ID: 430

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

suppressor of disruption of TFIIS

phosphate metabolism protein 8

suppressor of disruption of TFIIS-like

uncharacterized protein C24B11.05-like

suppressor of disruption of TFIIS-like

uncharacterized LOC100821281

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

uncharacterized LOC100273259

uncharacterized LOC100284091

uncharacterized LOC100283697

uncharacterized protein C24B11.05

uncharacterized LOC8079688

suppressor of disruption of TFIIS-like

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

uncharacterized LOC100819459

uncharacterized LOC100790020

uncharacterized protein C24B11.05

haloacid dehalogenase-like hydrolase superfamily protein

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

uncharacterized LOC100263185

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS

uncharacterized LOC25498498

uncharacterized protein C24B11.05

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

uncharacterized protein C24B11.05-like

suppressor of disruption of TFIIS

hypothetical protein

phosphate metabolism protein 8

uncharacterized LOC112499289

suppressor of disruption of TFIIS

uncharacterized protein C24B11.05

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	4
tae00480	Glutathione metabolism	4
tae01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	4
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
hvu00940	Phenylpropanoid biosynthesis	2
hvu00941	Flavonoid biosynthesis	2
hvu00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00040	Pentose and glucuronate interconversions	3
bdi01240	Biosynthesis of cofactors	3
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00053	Ascorbate and aldarate metabolism	2
bdi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3
osa00280	Valine, leucine and isoleucine degradation	3
osa00640	Propanoate metabolism	2
osa00785	Lipoic acid metabolism	2
osa01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	5
ath01210	2-Oxocarboxylic acid metabolism	3
ath04075	Plant hormone signal transduction	3
ath00640	Propanoate metabolism	2
ath00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	4
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00020	Citrate cycle (TCA cycle)	3
sly01200	Carbon metabolism	3
sly00190	Oxidative phosphorylation	2
sly00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00053	Ascorbate and aldarate metabolism	2
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	3
bra04075	Plant hormone signal transduction	2
bra00280	Valine, leucine and isoleucine degradation	2
bra00310	Lysine degradation	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	7
bra00630	Glyoxylate and dicarboxylate metabolism	6
bra00380	Tryptophan metabolism	3
bra04016	MAPK signaling pathway - plant	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	2
ghi00270	Cysteine and methionine metabolism	2
ghi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03040	Spliceosome	2
cit04144	Endocytosis	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00900	Terpenoid backbone biosynthesis	2
nta04144	Endocytosis	2
nta04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4

Expression

Expression pattern

Entrez Gene ID^*

123081002

123097912

123447322

123441171

123447319

100821281

100834392

9266306

4333827

4332401

100273259

100284091

100283697

8063526

8079688

110431237

817774

825377

831784

100819459

100790020

100775435

101246255

101251614

101251913

103867173

103867663

103847468

100263185

100257326

100245055

7474215

7465100

7478826

25491589

25498498

11414016

107932460

107940890

107950139

106436128

106394733

106387058

102599715

102599760

102624821

102622497

112499289

107792716

107806273

107808571

5722514

The preparation time of this page was 0.6 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	2	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123051952 (tae-r.2 coexpression data)

Top 50 enrichment test to 123051952 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**