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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106366335   la-related protein 1B 
 ath-u.5   LARP1c   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   LARP1b   winged-helix DNA-binding transcription factor family protein 
 gma-u.5   100775279   la-related protein 1C 
 gma-u.5   100785504   la-related protein 1C 
 gma-u.5   100778603   la-related protein 1B 
 vvi-u.5   100243746   la-related protein 1C 
 vvi-u.5   100243783   la-related protein 1C 
 ppo-u.5   7493989   la-related protein 1B 
 ppo-u.5   7462584   la-related protein 1C 
 ppo-u.5   18099146   la-related protein 1C 
 mtr-u.5   11409237   la-related protein 1B 
 mtr-u.5   11444870   la-related protein 1C 
 mtr-u.5   11418763   la-related protein 1C 
 sly-u.5   101255266   la-related protein 1C 
 sly-u.5   101244368   LA motif RNA-binding domain-containing protein 
 sly-u.5   104645983   la-related protein 1C 
 osa-u.5   4331669   la-related protein 1C 
 zma-u.5   100273740   uncharacterized LOC100273740 
 zma-u.5   103631737   la-related protein 1B 

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Top 50 coexpressed genes to 106366335 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106366335 (bna-r.1 coexpression data)

CoexMap"106366335"


bnaLOC106366335 | Entrez gene ID : 106366335    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 3 2 3 3 3 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_013661386.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013661386.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_013661386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106366335

.
ath-u.5
for
LARP1c

.
ath-u.5
for
LARP1b

.
gma-u.5
for
100775279

.
gma-u.5
for
100785504

.
gma-u.5
for
100778603

.
vvi-u.5
for
100243746

.
vvi-u.5
for
100243783

.
ppo-u.5
for
7493989

.
ppo-u.5
for
7462584

.
ppo-u.5
for
18099146

.
mtr-u.5
for
11409237

.
mtr-u.5
for
11444870

.
mtr-u.5
for
11418763

.
sly-u.5
for
101255266

.
sly-u.5
for
101244368

.
sly-u.5
for
104645983

.
osa-u.5
for
4331669

.
zma-u.5
for
100273740

.
zma-u.5
for
103631737

.


Ortholog ID: 1875
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol LARP1c LARP1b LOC100811819 LOC100803372 LOC104645983 LOC101255266 LOC4331669 LOC100273740 LOC103631737 LOC103834922 LOC103872339 LOC100243746 LOC100243783 LOC7493989 LOC7462584 LOC11427406 LOC11409237 LOC123098457 LOC123084897 LOC123449478 LOC107923978 LOC107943502 LOC106451458 LOC106392325 LOC8085462 LOC102587450 LOC102606259 LOC102610519 LOC102616770 LOC100843807 LOC107807801 LOC107807802
Function* winged-helix DNA-binding transcription factor family protein winged-helix DNA-binding transcription factor family protein la-related protein 1C la-related protein 1C la-related protein 1C la-related protein 1C la-related protein 1C uncharacterized LOC100273740 la-related protein 1B la-related protein 1C la-related protein 1C la-related protein 1C la-related protein 1C la-related protein 1B la-related protein 1C la-related protein 1C la-related protein 1B la-related protein 1B la-related protein 1B la-related protein 1B-like la-related protein 1C la-related protein 1C la-related protein 1C la-related protein 1B la-related protein 1B la-related protein 1C-like la-related protein 1C-like la-related protein 1C la-related protein 1C-like la-related protein 1B la-related protein 1C-like la-related protein 1C-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 5
tae00020 Citrate cycle (TCA cycle) 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 4
ghi01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03015 mRNA surveillance pathway 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829743 836742 100811819 100803372 104645983 101255266 4331669 100273740 103631737 103834922 103872339 100243746 100243783 7493989 7462584 11427406 11409237 123098457 123084897 123449478 107923978 107943502 106451458 106392325 8085462 102587450 102606259 102610519 102616770 100843807 107807801 107807802
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