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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106366476   protein SEH1 
 bna-r.1   106392092   protein SEH1 
 bra-r.6   103838156   protein SEH1 
 ath-u.5   SEH1H   Transducin/WD40 repeat-like superfamily protein 
 ghi-r.1   107947088   protein SEH1 
 ghi-r.1   107947110   protein SEH1 
 cit-r.1   102615718   protein SEH1 
 gma-u.5   100812825   protein SEH1 
 gma-u.5   100780788   protein SEH1 
 vvi-u.5   100263869   protein SEH1 
 ppo-u.5   7497837   protein SEH1 
 mtr-u.5   11419305   protein SEH1 
 sly-u.5   101261437   protein SEH1 
 sot-r.1   102593762   protein SEH1 
 nta-r.1   107815426   protein SEH1 
 nta-r.1   107813621   protein SEH1 
 osa-u.5   4326622   protein SEH1 
 zma-u.5   IDP351   Seh1-like protein 
 tae-r.2   123070155   protein SEH1 
 tae-r.2   123061512   protein SEH1 
 tae-r.2   123078588   protein SEH1 
 hvu-r.1   123443901   protein SEH1 
 sbi-r.1   8054396   protein SEH1 
 bdi-r.1   100832457   protein SEH1 
 cre-r.1   CHLRE_03g192000v5   uncharacterized protein 

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Top 50 coexpressed genes to 106366476 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106366476 (bna-r.1 coexpression data)

CoexMap"106366476"


bnaLOC106366476 | Entrez gene ID : 106366476    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
GO BP
GO:1904263 [list] [network] positive regulation of TORC1 signaling  (2 genes)  IEA  
GO:0034198 [list] [network] cellular response to amino acid starvation  (4 genes)  IEA  
GO CC
GO:0035859 [list] [network] Seh1-associated complex  (2 genes)  IEA  
GO:0031080 [list] [network] nuclear pore outer ring  (21 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (1760 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013661530.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for XP_013661530.2)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_013661530.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106366476
bna-r.1
for
106392092
bra-r.6
for
103838156
ath-u.5
for
SEH1H
ghi-r.1
for
107947088
ghi-r.1
for
107947110
cit-r.1
for
102615718
gma-u.5
for
100812825
gma-u.5
for
100780788
vvi-u.5
for
100263869
ppo-u.5
for
7497837
mtr-u.5
for
11419305
sly-u.5
for
101261437
sot-r.1
for
102593762
nta-r.1
for
107815426
nta-r.1
for
107813621
osa-u.5
for
4326622
zma-u.5
for
IDP351
tae-r.2
for
123070155
tae-r.2
for
123061512
tae-r.2
for
123078588
hvu-r.1
for
123443901
sbi-r.1
for
8054396
bdi-r.1
for
100832457
cre-r.1
for
CHLRE_03g192000v5


Ortholog ID: 10533
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106366476 LOC106392092 LOC103838156 SEH1H LOC107947088 LOC107947110 LOC102615718 LOC100812825 LOC100780788 LOC100263869 LOC7497837 LOC11419305 LOC101261437 LOC102593762 LOC107815426 LOC107813621 LOC4326622 IDP351 LOC123070155 LOC123061512 LOC123078588 LOC123443901 LOC8054396 LOC100832457 CHLRE_03g192000v5
Function* protein SEH1 protein SEH1 protein SEH1 Transducin/WD40 repeat-like superfamily protein protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 Seh1-like protein protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04122 Sulfur relay system 4
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00290 Valine, leucine and isoleucine biosynthesis 3
gma00770 Pantothenate and CoA biosynthesis 3
gma01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03008 Ribosome biogenesis in eukaryotes 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
sot01240 Biosynthesis of cofactors 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01232 Nucleotide metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma03020 RNA polymerase 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03060 Protein export 3
cre04141 Protein processing in endoplasmic reticulum 3
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106366476 106392092 103838156 842741 107947088 107947110 102615718 100812825 100780788 100263869 7497837 11419305 101261437 102593762 107815426 107813621 4326622 100284280 123070155 123061512 123078588 123443901 8054396 100832457 5718677
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