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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g192000v5   uncharacterized protein 
 ath-u.5   SEH1H   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100812825   protein SEH1 
 gma-u.5   100780788   protein SEH1 
 sly-u.5   101261437   protein SEH1 
 osa-u.5   4326622   protein SEH1 
 zma-u.5   IDP351   Seh1-like protein 
 vvi-u.5   100263869   protein SEH1 
 ppo-u.5   7497837   protein SEH1 
 mtr-u.5   11419305   protein SEH1 

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Top 50 coexpressed genes to CHLRE_03g192000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g192000v5 (cre-r.1 coexpression data)

CoexMap"5718677"


creCHLRE_03g192000v5 | Entrez gene ID : 5718677      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1904263 [list] [network] positive regulation of TORC1 signaling  (1 genes)  IEA  
GO:0034198 [list] [network] cellular response to amino acid starvation  (2 genes)  IEA  
GO CC
GO:0035859 [list] [network] Seh1-associated complex  (1 genes)  IEA  
GO:0031080 [list] [network] nuclear pore outer ring  (6 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (344 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001693095.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  nucl 1,  mito 1  (predict for XP_001693095.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_001693095.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g192000v5

.
ath-u.5
for
SEH1H

.
gma-u.5
for
100812825

.
gma-u.5
for
100780788

.
sly-u.5
for
101261437

.
osa-u.5
for
4326622

.
zma-u.5
for
IDP351

.
vvi-u.5
for
100263869

.
ppo-u.5
for
7497837

.
mtr-u.5
for
11419305

.


Ortholog ID: 10533
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol SEH1H LOC100812825 LOC100780788 LOC101261437 LOC4326622 IDP351 LOC103838156 LOC100263869 LOC7497837 LOC11419305 LOC123061512 LOC123078588 LOC123443901 LOC107947088 LOC107947110 LOC106366476 LOC106392092 CHLRE_03g192000v5 LOC8054396 LOC102593762 LOC102615718 LOC100832457 LOC107815426 LOC107813621
Function* Transducin/WD40 repeat-like superfamily protein protein SEH1 protein SEH1 protein SEH1 protein SEH1 Seh1-like protein protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 uncharacterized protein protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1 protein SEH1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00290 Valine, leucine and isoleucine biosynthesis 3
gma00770 Pantothenate and CoA biosynthesis 3
gma01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03008 Ribosome biogenesis in eukaryotes 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma03020 RNA polymerase 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04122 Sulfur relay system 4
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03060 Protein export 3
cre04141 Protein processing in endoplasmic reticulum 3
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
sot01240 Biosynthesis of cofactors 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01232 Nucleotide metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 3
nta01232 Nucleotide metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842741 100812825 100780788 101261437 4326622 100284280 103838156 100263869 7497837 11419305 123061512 123078588 123443901 107947088 107947110 106366476 106392092 5718677 8054396 102593762 102615718 100832457 107815426 107813621
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