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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106368401   E3 ubiquitin-protein ligase RNF170 
 bna-r.1   106436578   E3 ubiquitin-protein ligase RNF170 
 bna-r.1   106373761   E3 ubiquitin-protein ligase RNF170 
 bna-r.1   106354197   E3 ubiquitin-protein ligase RNF170 
 bra-r.6   103829327   E3 ubiquitin-protein ligase RNF170 
 bra-r.6   103831725   E3 ubiquitin-protein ligase RNF170 
 ath-u.5   AT1G22510   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) 
 ath-u.5   AT1G72175   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) 
 ghi-r.1   107959523   E3 ubiquitin-protein ligase RNF170 
 ghi-r.1   107914051   E3 ubiquitin-protein ligase RNF170 
 cit-r.1   102613940   uncharacterized LOC102613940 
 gma-u.5   100306204   uncharacterized LOC100306204 
 vvi-u.5   100247708   uncharacterized LOC100247708 
 ppo-u.5   18104389   uncharacterized LOC18104389 
 ppo-u.5   7455279   uncharacterized LOC7455279 
 mtr-u.5   11418365   E3 ubiquitin-protein ligase RNF170 
 mtr-u.5   11414140   E3 ubiquitin-protein ligase RNF170 
 sly-u.5   101246687   uncharacterized LOC101246687 
 sot-r.1   102578695   E3 ubiquitin-protein ligase RNF170-like 
 nta-r.1   107777507   uncharacterized LOC107777507 
 nta-r.1   107828712   uncharacterized LOC107828712 
 osa-u.5   4334720   uncharacterized LOC4334720 
 zma-u.5   100193852   uncharacterized LOC100193852 
 tae-r.2   123123685   E3 ubiquitin-protein ligase RNF170 
 tae-r.2   123087734   E3 ubiquitin-protein ligase RNF170 
 tae-r.2   123114197   E3 ubiquitin-protein ligase RNF170 
 hvu-r.1   123394969   E3 ubiquitin-protein ligase RNF170-like 
 sbi-r.1   8079656   E3 ubiquitin-protein ligase RNF170 
 bdi-r.1   100826204   E3 ubiquitin-protein ligase RNF170 

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Top 50 coexpressed genes to 106368401 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106368401 (bna-r.1 coexpression data)

CoexMap"106368401"


bnaLOC106368401 | Entrez gene ID : 106368401    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 2 1 1 1 2 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_013663811.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  vacu 3,  E.R. 3,  E.R._vacu 3,  E.R._plas 3  (predict for XP_013663811.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for XP_013663811.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106368401
bna-r.1
for
106436578
bna-r.1
for
106373761
bna-r.1
for
106354197
bra-r.6
for
103829327
bra-r.6
for
103831725
ath-u.5
for
AT1G22510
ath-u.5
for
AT1G72175
ghi-r.1
for
107959523
ghi-r.1
for
107914051
cit-r.1
for
102613940
gma-u.5
for
100306204
vvi-u.5
for
100247708
ppo-u.5
for
18104389
ppo-u.5
for
7455279
mtr-u.5
for
11418365
mtr-u.5
for
11414140
sly-u.5
for
101246687
sot-r.1
for
102578695
nta-r.1
for
107777507
nta-r.1
for
107828712
osa-u.5
for
4334720
zma-u.5
for
100193852
tae-r.2
for
123123685
tae-r.2
for
123087734
tae-r.2
for
123114197
hvu-r.1
for
123394969
sbi-r.1
for
8079656
bdi-r.1
for
100826204


Ortholog ID: 8252
Species bna bna bna bra bra ath ath ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106368401 LOC106373761 LOC106354197 LOC103829327 LOC103831725 AT1G22510 AT1G72175 LOC107959523 LOC107914051 LOC102613940 LOC100306204 LOC100247708 LOC18104389 LOC7455279 LOC11418365 LOC11414140 LOC101246687 LOC102578695 LOC107777507 LOC107828712 LOC4334720 LOC100193852 LOC123123685 LOC123087734 LOC123114197 LOC123394969 LOC8079656 LOC100826204
Function* E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 uncharacterized LOC102613940 uncharacterized LOC100306204 uncharacterized LOC100247708 uncharacterized LOC18104389 uncharacterized LOC7455279 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 uncharacterized LOC101246687 E3 ubiquitin-protein ligase RNF170-like uncharacterized LOC107777507 uncharacterized LOC107828712 uncharacterized LOC4334720 uncharacterized LOC100193852 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170-like E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00650 Butanoate metabolism 5
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00650 Butanoate metabolism 5
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 7
ghi03083 Polycomb repressive complex 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03022 Basal transcription factors 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 7
ghi03083 Polycomb repressive complex 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03022 Basal transcription factors 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr00910 Nitrogen metabolism 4
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 6
tae03272 Virion - Hepatitis viruses 5
tae04144 Endocytosis 5
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00053 Ascorbate and aldarate metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106368401 106373761 106354197 103829327 103831725 838857 843549 107959523 107914051 102613940 100306204 100247708 18104389 7455279 11418365 11414140 101246687 102578695 107777507 107828712 4334720 100193852 123123685 123087734 123114197 123394969 8079656 100826204
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