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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106370452   mediator of RNA polymerase II transcription subunit 31 
 bna-r.1   106439473   mediator of RNA polymerase II transcription subunit 31 
 bna-r.1   106379203   mediator of RNA polymerase II transcription subunit 31 
 bra-r.6   103845710   mediator of RNA polymerase II transcription subunit 31 
 ath-u.5   MED31   SOH1 family protein 
 ghi-r.1   107953608   mediator of RNA polymerase II transcription subunit 31 
 ghi-r.1   107937987   mediator of RNA polymerase II transcription subunit 31 
 cit-r.1   102609887   mediator of RNA polymerase II transcription subunit 31 
 gma-u.5   100818057   mediator of RNA polymerase II transcription subunit 31 
 gma-u.5   100527879   SOH1 domain-containing protein 
 vvi-u.5   100247653   mediator of RNA polymerase II transcription subunit 31 
 ppo-u.5   18103846   mediator of RNA polymerase II transcription subunit 31 
 ppo-u.5   7456679   mediator of RNA polymerase II transcription subunit 31 
 mtr-u.5   25485114   mediator of RNA polymerase II transcription subunit 31 
 sly-u.5   101246697   mediator of RNA polymerase II transcription subunit 31 
 sot-r.1   102597993   mediator of RNA polymerase II transcription subunit 31 
 nta-r.1   107782139   mediator of RNA polymerase II transcription subunit 31 
 nta-r.1   107819721   mediator of RNA polymerase II transcription subunit 31 
 osa-u.5   4342476   mediator of RNA polymerase II transcription subunit 31 
 osa-u.5   4349407   mediator of RNA polymerase II transcription subunit 31 
 zma-u.5   100193504   Mediator of RNA polymerase II transcription subunit 31 
 tae-r.2   123135909   mediator of RNA polymerase II transcription subunit 31 
 tae-r.2   123181656   mediator of RNA polymerase II transcription subunit 31 
 tae-r.2   123128236   mediator of RNA polymerase II transcription subunit 31 
 hvu-r.1   123439173   mediator of RNA polymerase II transcription subunit 31 
 sbi-r.1   8056933   mediator of RNA polymerase II transcription subunit 31 
 sbi-r.1   8055630   mediator of RNA polymerase II transcription subunit 31 
 bdi-r.1   100837580   mediator of RNA polymerase II transcription subunit 31 
 cre-r.1   CHLRE_12g520850v5   uncharacterized protein 

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Top 50 coexpressed genes to 106370452 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106370452 (bna-r.1 coexpression data)

CoexMap"106370452"


bnaLOC106370452 | Entrez gene ID : 106370452    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 2 1 1 1 2 2 1 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (19 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_013665913.1 [sequence] [blastp]
XP_048599071.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_013665913.1)
nucl 9,  cyto 1  (predict for XP_048599071.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013665913.1)
other 9  (predict for XP_048599071.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106370452
bna-r.1
for
106439473
bna-r.1
for
106379203
bra-r.6
for
103845710
ath-u.5
for
MED31
ghi-r.1
for
107953608
ghi-r.1
for
107937987
cit-r.1
for
102609887
gma-u.5
for
100818057
gma-u.5
for
100527879
vvi-u.5
for
100247653
ppo-u.5
for
18103846
ppo-u.5
for
7456679
mtr-u.5
for
25485114
sly-u.5
for
101246697
sot-r.1
for
102597993
nta-r.1
for
107782139
nta-r.1
for
107819721
osa-u.5
for
4342476
osa-u.5
for
4349407
zma-u.5
for
100193504
tae-r.2
for
123135909
tae-r.2
for
123181656
tae-r.2
for
123128236
hvu-r.1
for
123439173
sbi-r.1
for
8056933
sbi-r.1
for
8055630
bdi-r.1
for
100837580
cre-r.1
for
CHLRE_12g520850v5


Ortholog ID: 7341
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC106370452 LOC106439473 LOC103845710 MED31 LOC107953608 LOC107937987 LOC102609887 LOC100818057 LOC100527879 LOC100247653 LOC18103846 LOC7456679 LOC25485114 LOC101246697 LOC102597993 LOC107782139 LOC107819721 LOC4342476 LOC4349407 LOC100193504 LOC123135909 LOC123181656 LOC123128236 LOC123439173 LOC8056933 LOC8055630 LOC100837580 CHLRE_12g520850v5
Function* mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 SOH1 family protein mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 SOH1 domain-containing protein mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 Mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 mediator of RNA polymerase II transcription subunit 31 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi03018 RNA degradation 3
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit01200 Carbon metabolism 3
cit03050 Proteasome 3
cit00190 Oxidative phosphorylation 3
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00910 Nitrogen metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa04141 Protein processing in endoplasmic reticulum 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04130 SNARE interactions in vesicular transport 3
tae04145 Phagosome 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04120 Ubiquitin mediated proteolysis 3
tae04130 SNARE interactions in vesicular transport 3
tae04145 Phagosome 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae04144 Endocytosis 3
tae04120 Ubiquitin mediated proteolysis 3
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106370452 106439473 103845710 832113 107953608 107937987 102609887 100818057 100527879 100247653 18103846 7456679 25485114 101246697 102597993 107782139 107819721 4342476 4349407 100193504 123135909 123181656 123128236 123439173 8056933 8055630 100837580 66055588
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