Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106377577   nuclear pore complex protein NUP85 
 ath-u.5   AT4G32910   nuclear pore complex Nup85-like protein 
 gma-u.5   100785741   nuclear pore complex protein NUP85 
 vvi-u.5   100256006   nuclear pore complex protein NUP85 
 ppo-u.5   7476700   nuclear pore complex protein NUP85 
 mtr-u.5   11434621   nuclear pore complex protein NUP85 
 sly-u.5   101253512   nuclear pore complex protein NUP85 
 osa-u.5   4326176   nuclear pore complex protein NUP85 
 zma-u.5   100381924   Nuclear pore complex protein NUP85 

close


Top 50 coexpressed genes to 106377577 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106377577 (bna-r.1 coexpression data)

CoexMap"106377577"


bnaLOC106377577 | Entrez gene ID : 106377577    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (92 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (145 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (935 genes)  IEA  
GO CC
GO:0031080 [list] [network] nuclear pore outer ring  (21 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (60 genes)  IEA  
Protein XP_013673305.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_013673305.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_013673305.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106377577

.
ath-u.5
for
AT4G32910

.
gma-u.5
for
100785741

.
vvi-u.5
for
100256006

.
ppo-u.5
for
7476700

.
mtr-u.5
for
11434621

.
sly-u.5
for
101253512

.
osa-u.5
for
4326176

.
zma-u.5
for
100381924

.


Ortholog ID: 10244
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G32910 LOC100785741 LOC101253512 LOC4326176 LOC100381924 LOC103850288 LOC100256006 LOC7476700 LOC11434621 LOC123079030 LOC123070626 LOC123444391 LOC107897098 LOC107901527 LOC106364969 LOC106377577 CHLRE_08g383650v5 LOC8075564 LOC102591614 LOC102607442 LOC100830016 LOC107825191 LOC107783626
Function* nuclear pore complex Nup85-like protein nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 Nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85-like nuclear pore complex protein NUP85 nuclear pore complex protein NUP85-like nuclear pore complex protein NUP85 uncharacterized protein nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85 nuclear pore complex protein NUP85
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03440 Homologous recombination 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma04120 Ubiquitin mediated proteolysis 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 8
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03015 mRNA surveillance pathway 4
tae03020 RNA polymerase 4
tae03013 Nucleocytoplasmic transport 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03015 mRNA surveillance pathway 4
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03020 RNA polymerase 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03020 RNA polymerase 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna00500 Starch and sucrose metabolism 4
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
sbi03050 Proteasome 2
sbi03060 Protein export 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03013 Nucleocytoplasmic transport 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829427 100785741 101253512 4326176 100381924 103850288 100256006 7476700 11434621 123079030 123070626 123444391 107897098 107901527 106364969 106377577 5719819 8075564 102591614 102607442 100830016 107825191 107783626
The preparation time of this page was 0.1 [sec].