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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106381245   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like 
 bna-r.1   106390202   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like 
 bna-r.1   106384873   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 bna-r.1   125605518   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like 
 bra-r.6   103868299   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 ath-u.5   CCB3   cofactor assembly, complex C (B6F) 
 ghi-r.1   121223589   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 ghi-r.1   107923847   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 cit-r.1   102619327   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 gma-u.5   100793885   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 gma-u.5   100500538   YGGT domain-containing protein 
 vvi-u.5   100244373   uncharacterized LOC100244373 
 ppo-u.5   7464785   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 mtr-u.5   25485015   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 sly-u.5   101254143   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 sot-r.1   102587391   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 nta-r.1   107777276   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 nta-r.1   107786710   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like 
 osa-u.5   4324472   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 zma-u.5   100382482   Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 chloroplastic 
 tae-r.2   123080927   uncharacterized LOC123080927 
 hvu-r.1   123445640   ylmG homolog protein 1-1, chloroplastic 
 cre-r.1   CHLRE_01g052400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106381245 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106381245 (bna-r.1 coexpression data)

CoexMap"106381245"


bnaLOC106381245 | Entrez gene ID : 106381245    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu cre bdi sbi
Paralog 4 1 1 2 1 2 1 1 1 1 1 2 1 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
Protein XP_013676590.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013676590.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013676590.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106381245
bna-r.1
for
106390202
bna-r.1
for
106384873
bna-r.1
for
125605518
bra-r.6
for
103868299
ath-u.5
for
CCB3
ghi-r.1
for
121223589
ghi-r.1
for
107923847
cit-r.1
for
102619327
gma-u.5
for
100793885
gma-u.5
for
100500538
vvi-u.5
for
100244373
ppo-u.5
for
7464785
mtr-u.5
for
25485015
sly-u.5
for
101254143
sot-r.1
for
102587391
nta-r.1
for
107777276
nta-r.1
for
107786710
osa-u.5
for
4324472
zma-u.5
for
100382482
tae-r.2
for
123080927
hvu-r.1
for
123445640
cre-r.1
for
CHLRE_01g052400v5


Ortholog ID: 9128
Species bna bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae hvu cre
Symbol LOC106381245 LOC106390202 LOC125605518 LOC103868299 CCB3 LOC121223589 LOC107923847 LOC102619327 LOC100793885 LOC100500538 LOC100244373 LOC7464785 LOC25485015 LOC101254143 LOC102587391 LOC107777276 LOC107786710 LOC4324472 LOC100382482 LOC123080927 LOC123445640 CHLRE_01g052400v5
Function* protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic cofactor assembly, complex C (B6F) protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic YGGT domain-containing protein uncharacterized LOC100244373 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 chloroplastic uncharacterized LOC123080927 ylmG homolog protein 1-1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00190 Oxidative phosphorylation 2
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 6
hvu01200 Carbon metabolism 6
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00710 Carbon fixation by Calvin cycle 4
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre01240 Biosynthesis of cofactors 2
cre00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106381245 106390202 125605518 103868299 833608 121223589 107923847 102619327 100793885 100500538 100244373 7464785 25485015 101254143 102587391 107777276 107786710 4324472 100382482 123080927 123445640 5715778
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