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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106382789   gamma-tubulin complex component 4-like 
 bna-r.1   106366134   gamma-tubulin complex component 4 
 bra-r.6   103841300   gamma-tubulin complex component 4 
 ath-u.5   GCP4   GAMMA-TUBULIN COMPLEX PROTEIN 4 
 ghi-r.1   107913710   gamma-tubulin complex component 4 
 ghi-r.1   107912367   gamma-tubulin complex component 4 
 ghi-r.1   107924483   gamma-tubulin complex component 4 
 cit-r.1   102608533   gamma-tubulin complex component 4 
 gma-u.5   100819794   gamma-tubulin complex component 4 homolog 
 gma-u.5   100786441   gamma-tubulin complex component 4 homolog 
 vvi-u.5   100248708   gamma-tubulin complex component 4 
 ppo-u.5   7491297   gamma-tubulin complex component 4 homolog 
 mtr-u.5   11416818   gamma-tubulin complex component 4 homolog 
 sly-u.5   101244901   gamma-tubulin complex component 4 
 sot-r.1   102601656   gamma-tubulin complex component 4 
 nta-r.1   107769278   gamma-tubulin complex component 4-like 
 nta-r.1   107760079   gamma-tubulin complex component 4 homolog 
 osa-u.5   4337843   gamma-tubulin complex component 4 
 zma-u.5   100381625   Gamma-tubulin complex component 4 
 tae-r.2   123180547   gamma-tubulin complex component 4 
 tae-r.2   123113125   gamma-tubulin complex component 4 
 tae-r.2   123191584   gamma-tubulin complex component 4 
 hvu-r.1   123425757   gamma-tubulin complex component 4 
 sbi-r.1   8076003   gamma-tubulin complex component 4 
 bdi-r.1   100842649   gamma-tubulin complex component 4 
 cre-r.1   CHLRE_01g019150v5   uncharacterized protein 

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Top 50 coexpressed genes to 106382789 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106382789 (bna-r.1 coexpression data)

CoexMap"106382789"


bnaLOC106382789 | Entrez gene ID : 106382789    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007020 [list] [network] microtubule nucleation  (20 genes)  IEA  
GO:0031122 [list] [network] cytoplasmic microtubule organization  (65 genes)  IEA  
GO:0051225 [list] [network] spindle assembly  (105 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (352 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (556 genes)  IEA  
GO CC
GO:0000923 [list] [network] equatorial microtubule organizing center  (13 genes)  IEA  
GO:0000930 [list] [network] gamma-tubulin complex  (16 genes)  IEA  
GO:0000922 [list] [network] spindle pole  (27 genes)  IEA  
GO:0005813 [list] [network] centrosome  (106 genes)  IEA  
GO MF
GO:0043015 [list] [network] gamma-tubulin binding  (14 genes)  IEA  
GO:0051011 [list] [network] microtubule minus-end binding  (20 genes)  IEA  
Protein XP_013678303.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_013678303.2)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_013678303.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106382789
bna-r.1
for
106366134
bra-r.6
for
103841300
ath-u.5
for
GCP4
ghi-r.1
for
107913710
ghi-r.1
for
107912367
ghi-r.1
for
107924483
cit-r.1
for
102608533
gma-u.5
for
100819794
gma-u.5
for
100786441
vvi-u.5
for
100248708
ppo-u.5
for
7491297
mtr-u.5
for
11416818
sly-u.5
for
101244901
sot-r.1
for
102601656
nta-r.1
for
107769278
nta-r.1
for
107760079
osa-u.5
for
4337843
zma-u.5
for
100381625
tae-r.2
for
123180547
tae-r.2
for
123113125
tae-r.2
for
123191584
hvu-r.1
for
123425757
sbi-r.1
for
8076003
bdi-r.1
for
100842649
cre-r.1
for
CHLRE_01g019150v5


Ortholog ID: 9539
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106382789 LOC106366134 LOC103841300 GCP4 LOC107913710 LOC107912367 LOC107924483 LOC102608533 LOC100819794 LOC100786441 LOC100248708 LOC7491297 LOC11416818 LOC101244901 LOC102601656 LOC107769278 LOC107760079 LOC4337843 LOC100381625 LOC123180547 LOC123113125 LOC123191584 LOC123425757 LOC8076003 LOC100842649 CHLRE_01g019150v5
Function* gamma-tubulin complex component 4-like gamma-tubulin complex component 4 gamma-tubulin complex component 4 GAMMA-TUBULIN COMPLEX PROTEIN 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4-like gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 Gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00600 Sphingolipid metabolism 3
ppo04145 Phagosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 4
sot03430 Mismatch repair 3
sot03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 4
nta03450 Non-homologous end-joining 2
nta03020 RNA polymerase 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03410 Base excision repair 4
nta03420 Nucleotide excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106382789 106366134 103841300 824543 107913710 107912367 107924483 102608533 100819794 100786441 100248708 7491297 11416818 101244901 102601656 107769278 107760079 4337843 100381625 123180547 123113125 123191584 123425757 8076003 100842649 5715174
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