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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7491297   gamma-tubulin complex component 4 homolog 
 ppo-r.4   7491297   gamma-tubulin complex component 4 homolog 
 ppo-m.4   7491297   gamma-tubulin complex component 4 homolog 
 gma-u.5   100819794   gamma-tubulin complex component 4 homolog 
 gma-u.5   100786441   gamma-tubulin complex component 4 homolog 
 mtr-u.5   11416818   gamma-tubulin complex component 4 homolog 
 ath-u.5   GCP4   GAMMA-TUBULIN COMPLEX PROTEIN 4 
 vvi-u.5   100248708   gamma-tubulin complex component 4 
 sly-u.5   101244901   gamma-tubulin complex component 4 
 osa-u.5   4337843   gamma-tubulin complex component 4 
 zma-u.5   100381625   Gamma-tubulin complex component 4 

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Top 50 coexpressed genes to 7491297 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7491297 (ppo-u.5 coexpression data)

CoexMap"7491297"


ppoLOC7491297 | Entrez gene ID : 7491297    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007020 [list] [network] microtubule nucleation  (11 genes)  IEA  
GO:0031122 [list] [network] cytoplasmic microtubule organization  (27 genes)  IEA  
GO:0051225 [list] [network] spindle assembly  (41 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (90 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (243 genes)  IEA  
GO CC
GO:0000923 [list] [network] equatorial microtubule organizing center  (6 genes)  IEA  
GO:0000930 [list] [network] gamma-tubulin complex  (9 genes)  IEA  
GO:0000922 [list] [network] spindle pole  (12 genes)  IEA  
GO:0005813 [list] [network] centrosome  (39 genes)  IEA  
GO MF
GO:0043015 [list] [network] gamma-tubulin binding  (6 genes)  IEA  
GO:0051011 [list] [network] microtubule minus-end binding  (9 genes)  IEA  
Protein XP_002320339.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for XP_002320339.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002320339.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7491297

.
ppo-r.4
for
7491297

.
ppo-m.4
for
7491297

.
gma-u.5
for
100819794

.
gma-u.5
for
100786441

.
mtr-u.5
for
11416818

.
ath-u.5
for
GCP4

.
vvi-u.5
for
100248708

.
sly-u.5
for
101244901

.
osa-u.5
for
4337843

.
zma-u.5
for
100381625

.


Ortholog ID: 9539
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol GCP4 LOC100786441 LOC100819794 LOC101244901 LOC4337843 LOC100381625 LOC103841300 LOC100248708 LOC7491297 LOC11416818 LOC123180547 LOC123191584 LOC123425757 LOC107924483 LOC107912367 LOC106366134 LOC106382789 CHLRE_01g019150v5 LOC8076003 LOC102601656 LOC102608533 LOC100842649 LOC107769278 LOC107760079
Function* GAMMA-TUBULIN COMPLEX PROTEIN 4 gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 gamma-tubulin complex component 4 Gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 homolog gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4-like uncharacterized protein gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4 gamma-tubulin complex component 4-like gamma-tubulin complex component 4 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00600 Sphingolipid metabolism 3
ppo04145 Phagosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 4
sot03430 Mismatch repair 3
sot03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 4
nta03450 Non-homologous end-joining 2
nta03020 RNA polymerase 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03410 Base excision repair 4
nta03420 Nucleotide excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824543 100786441 100819794 101244901 4337843 100381625 103841300 100248708 7491297 11416818 123180547 123191584 123425757 107924483 107912367 106366134 106382789 5715174 8076003 102601656 102608533 100842649 107769278 107760079
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