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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106384828  U-box domain-containing protein 56-like 
 bna-r.1  125584346  U-box domain-containing protein 54-like 
 bna-r.1  111202347  U-box domain-containing protein 54-like 
 bra-r.6  103844670  U-box domain-containing protein 54 
 bra-r.6  103844669  U-box domain-containing protein 56 
 ath-u.5  PUB54  plant U-box 54 
 ath-u.5  AT1G01670  RING/U-box superfamily protein 
 cre-r.1  CHLRE_08g383550v5  uncharacterized protein 

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Top 50 coexpressed genes to 106384828 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106384828 (bna-r.1 coexpression data)

CoexMap"106384828"


bnaLOC106384828 | Entrez gene ID : 106384828
Species bna bra ath cre hvu sot bdi sly nta vvi osa tae ppo zma mtr sbi gma ghi cit
Paralog 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1065 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1079 genes)  IEA  
Protein XP_048606455.1 [sequence] [blastp]
XP_048606457.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  nucl 1,  vacu 1,  chlo 1,  cyto 1,  mito 1,  plas 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_048606455.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_048606457.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_048606455.1)
other 8  (predict for XP_048606457.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106384828


bna-r.1
for
125584346


bna-r.1
for
111202347


bra-r.6
for
103844670


bra-r.6
for
103844669


ath-u.5
for
PUB54


ath-u.5
for
AT1G01670


cre-r.1
for
CHLRE_08g383550v5



Ortholog ID: 12956
Species bna bna bna bra bra ath ath cre
Symbol LOC111202347 LOC106370859 LOC106370857 LOC103844670 LOC103844669 PUB54 AT1G01670 CHLRE_08g383550v5
Function* U-box domain-containing protein 54-like U-box domain-containing protein 56-like U-box domain-containing protein 54 U-box domain-containing protein 54 U-box domain-containing protein 56 plant U-box 54 RING/U-box superfamily protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111202347 106370859 106370857 103844670 103844669 839251 839365 5719821
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