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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106388405   pentatricopeptide repeat-containing protein At4g13650 
 bna-r.1   106426942   pentatricopeptide repeat-containing protein At4g13650 
 bra-r.6   103863612   pentatricopeptide repeat-containing protein At4g13650 
 ath-u.5   AT4G13650   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107942851   pentatricopeptide repeat-containing protein At4g13650 
 ghi-r.1   107888460   pentatricopeptide repeat-containing protein At4g13650 
 cit-r.1   102616396   pentatricopeptide repeat-containing protein At4g13650 
 gma-u.5   100788946   pentatricopeptide repeat-containing protein At4g13650 
 gma-u.5   100776269   pentatricopeptide repeat-containing protein At4g13650-like 
 vvi-u.5   100246875   NADPH-dependent aldehyde reductase-like protein, chloroplastic 
 ppo-u.5   7482355   pentatricopeptide repeat-containing protein At4g13650 
 mtr-u.5   25495868   pentatricopeptide repeat-containing protein At4g13650 
 sly-u.5   101266794   pentatricopeptide repeat-containing protein At4g13650 
 sot-r.1   102598486   pentatricopeptide repeat-containing protein At4g13650 
 nta-r.1   107800457   pentatricopeptide repeat-containing protein At4g13650-like 
 nta-r.1   107765897   pentatricopeptide repeat-containing protein At4g13650-like 
 osa-u.5   4352470   pentatricopeptide repeat-containing protein 
 zma-u.5   100274763   pentatricopeptide repeat-containing protein At4g13650 
 zma-u.5   103646503   pentatricopeptide repeat-containing protein At4g13650 
 zma-u.5   109943998   pentatricopeptide repeat-containing protein At4g13650 
 hvu-r.1   123396014   pentatricopeptide repeat-containing protein At4g13650 
 bdi-r.1   100831842   pentatricopeptide repeat-containing protein At4g13650 

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Top 50 coexpressed genes to 106388405 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106388405 (bna-r.1 coexpression data)

CoexMap"106388405"


bnaLOC106388405 | Entrez gene ID : 106388405    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma hvu bdi cre tae sbi
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 3 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013683924.2 [sequence] [blastp]
XP_048634312.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_013683924.2)
chlo 8,  nucl 1  (predict for XP_048634312.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_013683924.2)
mito 6,  chlo 4  (predict for XP_048634312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106388405
bna-r.1
for
106426942
bra-r.6
for
103863612
ath-u.5
for
AT4G13650
ghi-r.1
for
107942851
ghi-r.1
for
107888460
cit-r.1
for
102616396
gma-u.5
for
100788946
gma-u.5
for
100776269
vvi-u.5
for
100246875
ppo-u.5
for
7482355
mtr-u.5
for
25495868
sly-u.5
for
101266794
sot-r.1
for
102598486
nta-r.1
for
107800457
nta-r.1
for
107765897
osa-u.5
for
4352470
zma-u.5
for
100274763
zma-u.5
for
103646503
zma-u.5
for
109943998
hvu-r.1
for
123396014
bdi-r.1
for
100831842


Ortholog ID: 9570
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma zma hvu bdi
Symbol LOC106388405 LOC106426942 LOC103863612 AT4G13650 LOC107942851 LOC107888460 LOC102616396 LOC100788946 LOC100776269 LOC100246875 LOC7482355 LOC25495868 LOC101266794 LOC102598486 LOC107800457 LOC107765897 LOC4352470 LOC100274763 LOC103646503 LOC109943998 LOC123396014 LOC100831842
Function* pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650-like NADPH-dependent aldehyde reductase-like protein, chloroplastic pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106388405 106426942 103863612 826999 107942851 107888460 102616396 100788946 100776269 100246875 7482355 25495868 101266794 102598486 107800457 107765897 4352470 100274763 103646503 109943998 123396014 100831842
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