ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106389615	ubinuclein-2
ath-u.5	AT1G21610	wound-responsive family protein
ath-u.5	AT1G77310	wound-responsive family protein
gma-u.5	100799794	ubinuclein-1
gma-u.5	100795185	ubinuclein-1
gma-u.5	100793966	ubinuclein-1
vvi-u.5	100255662	ubinuclein-1
ppo-u.5	7467863	ubinuclein-1
ppo-u.5	7466868	ubinuclein-1
mtr-u.5	25489705	ubinuclein-1
mtr-u.5	25482447	ubinuclein-1
sly-u.5	101258212	ubinuclein-1-like
osa-u.5	4338838	ubinuclein-1
osa-u.5	4325002	ubinuclein-1
zma-u.5	103650918	ubinuclein-1

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

Protein

XP_013685374.2 [sequence] [blastp]
XP_013685375.2 [sequence] [blastp]
XP_022551933.2 [sequence] [blastp]
XP_022551934.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_013685374.2)
nucl 9	(predict for XP_013685375.2)
nucl 9	(predict for XP_022551933.2)
nucl 9	(predict for XP_022551934.2)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for XP_013685374.2)
other 8, chlo 3	(predict for XP_013685375.2)
other 8, chlo 3	(predict for XP_022551933.2)
other 8, chlo 3	(predict for XP_022551934.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106389615	ath-u.5 for AT1G21610	ath-u.5 for AT1G77310	gma-u.5 for 100799794	gma-u.5 for 100795185	gma-u.5 for 100793966	vvi-u.5 for 100255662	ppo-u.5 for 7467863	ppo-u.5 for 7466868	mtr-u.5 for 25489705	mtr-u.5 for 25482447	sly-u.5 for 101258212	osa-u.5 for 4338838	osa-u.5 for 4325002	zma-u.5 for 103650918

Ortholog ID: 4313

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

ubinuclein-2-like

ubinuclein-2

wound-responsive family protein

ubinuclein-1

ubinuclein-1-like

uncharacterized LOC102605978

ubinuclein-1

ubinuclein-1-like

ubinuclein-1

ubinuclein-1-like

ubinuclein-1

uncharacterized LOC8063142

ubinuclein-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03440	Homologous recombination	3
ath03410	Base excision repair	2
ath03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	8
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	8
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4
mtr03082	ATP-dependent chromatin remodeling	3
mtr04120	Ubiquitin mediated proteolysis	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	3
mtr03410	Base excision repair	3
mtr03420	Nucleotide excision repair	3
mtr03430	Mismatch repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	4
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04145	Phagosome	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	4
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma03250	Viral life cycle - HIV-1	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2
hvu03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2
bdi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

Expression

Expression pattern

Entrez Gene ID^*

106396982

111213115

103853066

103830572

844067

838762

107951490

107910368

102623414

100795185

100799794

100255662

7467863

25489705

25482447

101258212

102605978

107781472

107787647

4325002

4338838

103650918

123182081

123071807

123445119

123442594

8063142

100823566

100826032

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106389615 (bna-r.1 coexpression data)

Top 50 enrichment test to 106389615 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	1	2	2	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106389615 (bna-r.1 coexpression data)

Top 50 enrichment test to 106389615 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**