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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106390166   glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic 
 ath-u.5   GAPCP-2   glyceraldehyde-3-phosphate dehydrogenase of plastid 2 
 ath-u.5   GAPC1   glyceraldehyde-3-phosphate dehydrogenase C subunit 1 
 ath-u.5   GAPC2   glyceraldehyde-3-phosphate dehydrogenase C2 
 gma-u.5   100807342   glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like 
 gma-u.5   100804853   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 gma-u.5   100789951   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 vvi-u.5   100233024   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 vvi-u.5   100265689   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 vvi-u.5   100264789   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 ppo-u.5   7480933   glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic 
 ppo-u.5   7454689   glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic 
 ppo-u.5   7460038   glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic 
 mtr-u.5   11425454   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 mtr-u.5   11407960   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 mtr-u.5   11441068   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 sly-u.5   GAPDH   glyceraldehyde 3-phosphate dehydrogenase 
 sly-u.5   101249641   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 sly-u.5   GAPC2   glyceraldehyde-3-phosphate dehydrogenase 
 osa-u.5   4336216   glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like 
 osa-u.5   4329892   glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic-like 
 osa-u.5   4328446   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 zma-u.5   100037774   uncharacterized LOC100037774 
 zma-u.5   100191900   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 zma-u.5   103632492   glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic 

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Top 50 coexpressed genes to 106390166 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106390166 (bna-r.1 coexpression data)

CoexMap"106390166"


bnaLOC106390166 | Entrez gene ID : 106390166    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00010 [list] [network] Glycolysis / Gluconeogenesis (386 genes)
bna00710 [list] [network] Carbon fixation by Calvin cycle (246 genes)
bna01200 [list] [network] Carbon metabolism (888 genes)
bna01230 [list] [network] Biosynthesis of amino acids (773 genes)
GO BP
GO:0006006 [list] [network] glucose metabolic process  (128 genes)  IEA  
GO CC
GO MF
GO:0016620 [list] [network] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor  (145 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (177 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (240 genes)  IEA  
Protein XP_013686026.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_013686026.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_013686026.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106390166
ath-u.5
for
GAPCP-2
ath-u.5
for
GAPC1
ath-u.5
for
GAPC2
gma-u.5
for
100807342
gma-u.5
for
100804853
gma-u.5
for
100789951
vvi-u.5
for
100233024
vvi-u.5
for
100265689
vvi-u.5
for
100264789
ppo-u.5
for
7480933
ppo-u.5
for
7454689
ppo-u.5
for
7460038
mtr-u.5
for
11425454
mtr-u.5
for
11407960
mtr-u.5
for
11441068
sly-u.5
for
GAPDH
sly-u.5
for
101249641
sly-u.5
for
GAPC2
osa-u.5
for
4336216
osa-u.5
for
4329892
osa-u.5
for
4328446
zma-u.5
for
100037774
zma-u.5
for
100191900
zma-u.5
for
103632492


Ortholog ID: 493
Species bna bna bra ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol LOC106447623 LOC106382350 LOC103850055 GAPCP-1 GAPC2 LOC107957019 LOC107926568 LOC102578015 LOC102624117 LOC100783902 LOC100782924 LOC100233024 LOC100264789 LOC7484457 LOC7460675 LOC11407960 LOC101249641 LOC101256813 LOC102589564 LOC102605742 LOC107776287 LOC107790641 LOC4341782 LOC4336216 LOC100282981 LOC103632492 LOC123163161 LOC100125727 LOC123413551 LOC123401526 LOC110430988 LOC110430989 LOC100845915 CHLRE_12g485150v5
Function* glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase of plastid 1 glyceraldehyde-3-phosphate dehydrogenase C2 glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like Glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 9
bra01230 Biosynthesis of amino acids 9
bra03050 Proteasome 8
bra00710 Carbon fixation by Calvin cycle 8
bra00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 6
ath01200 Carbon metabolism 5
ath03018 RNA degradation 4
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00010 Glycolysis / Gluconeogenesis 5
ath01230 Biosynthesis of amino acids 4
ath00190 Oxidative phosphorylation 4
ath00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 12
ghi01200 Carbon metabolism 12
ghi00010 Glycolysis / Gluconeogenesis 10
ghi01230 Biosynthesis of amino acids 9
ghi00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 9
ghi01200 Carbon metabolism 9
ghi00010 Glycolysis / Gluconeogenesis 8
ghi00520 Amino sugar and nucleotide sugar metabolism 6
ghi01250 Biosynthesis of nucleotide sugars 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 12
cit00010 Glycolysis / Gluconeogenesis 11
cit01230 Biosynthesis of amino acids 11
cit00710 Carbon fixation by Calvin cycle 6
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00010 Glycolysis / Gluconeogenesis 5
cit00710 Carbon fixation by Calvin cycle 5
cit01230 Biosynthesis of amino acids 5
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00710 Carbon fixation by Calvin cycle 10
gma00010 Glycolysis / Gluconeogenesis 8
gma01230 Biosynthesis of amino acids 7
gma00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 18
gma01230 Biosynthesis of amino acids 11
gma01200 Carbon metabolism 10
gma00620 Pyruvate metabolism 8
gma00350 Tyrosine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 14
vvi01230 Biosynthesis of amino acids 9
vvi00710 Carbon fixation by Calvin cycle 8
vvi00010 Glycolysis / Gluconeogenesis 8
vvi00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 6
vvi01200 Carbon metabolism 5
vvi01230 Biosynthesis of amino acids 5
vvi00620 Pyruvate metabolism 2
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo03010 Ribosome 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo01200 Carbon metabolism 7
ppo00010 Glycolysis / Gluconeogenesis 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 10
mtr01230 Biosynthesis of amino acids 9
mtr00710 Carbon fixation by Calvin cycle 8
mtr00010 Glycolysis / Gluconeogenesis 7
mtr00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 7
sly01230 Biosynthesis of amino acids 6
sly03010 Ribosome 4
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 10
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 4
sot00260 Glycine, serine and threonine metabolism 4
sot00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00190 Oxidative phosphorylation 2
sot00270 Cysteine and methionine metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03018 RNA degradation 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 8
nta01200 Carbon metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00710 Carbon fixation by Calvin cycle 4
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 7
osa00010 Glycolysis / Gluconeogenesis 6
osa01200 Carbon metabolism 6
osa01230 Biosynthesis of amino acids 6
osa00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 6
zma00010 Glycolysis / Gluconeogenesis 4
zma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma01200 Carbon metabolism 3
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 12
tae01230 Biosynthesis of amino acids 12
tae00710 Carbon fixation by Calvin cycle 10
tae00010 Glycolysis / Gluconeogenesis 6
tae00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 18
tae01230 Biosynthesis of amino acids 17
tae00010 Glycolysis / Gluconeogenesis 14
tae00710 Carbon fixation by Calvin cycle 11
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 4
hvu01200 Carbon metabolism 4
hvu01230 Biosynthesis of amino acids 4
hvu00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 7
hvu01200 Carbon metabolism 7
hvu01230 Biosynthesis of amino acids 7
hvu00620 Pyruvate metabolism 5
hvu00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 10
sbi00010 Glycolysis / Gluconeogenesis 8
sbi00710 Carbon fixation by Calvin cycle 7
sbi01230 Biosynthesis of amino acids 7
sbi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 9
sbi00010 Glycolysis / Gluconeogenesis 7
sbi00710 Carbon fixation by Calvin cycle 7
sbi01230 Biosynthesis of amino acids 7
sbi00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 14
bdi01200 Carbon metabolism 13
bdi00010 Glycolysis / Gluconeogenesis 9
bdi00270 Cysteine and methionine metabolism 6
bdi00710 Carbon fixation by Calvin cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00020 Citrate cycle (TCA cycle) 3
cre01230 Biosynthesis of amino acids 2
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106447623 106382350 103850055 844291 837904 107957019 107926568 102578015 102624117 100783902 100782924 100233024 100264789 7484457 7460675 11407960 101249641 101256813 102589564 102605742 107776287 107790641 4341782 4336216 100282981 103632492 123163161 100125727 123413551 123401526 110430988 110430989 100845915 5728718
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