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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106394376   pentatricopeptide repeat-containing protein At2g16880 
 bna-r.1   106428678   pentatricopeptide repeat-containing protein At2g16880 
 bra-r.6   103846017   pentatricopeptide repeat-containing protein At2g16880 
 ath-u.5   AT2G16880   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107948968   pentatricopeptide repeat-containing protein At2g16880 
 ghi-r.1   121203005   pentatricopeptide repeat-containing protein At2g16880 
 cit-r.1   102624240   pentatricopeptide repeat-containing protein At2g16880 
 gma-u.5   100808380   pentatricopeptide repeat-containing protein At2g16880 
 vvi-u.5   100254777   pentatricopeptide repeat-containing protein At2g16880 
 ppo-u.5   7458638   pentatricopeptide repeat-containing protein At2g16880 
 mtr-u.5   25484953   pentatricopeptide repeat-containing protein At2g16880 
 sly-u.5   104645441   pentatricopeptide repeat-containing protein At2g16880 
 sot-r.1   102596368   pentatricopeptide repeat-containing protein At2g16880 
 nta-r.1   107790367   uncharacterized LOC107790367 
 nta-r.1   107786329   uncharacterized LOC107786329 
 osa-u.5   9271741   pentatricopeptide repeat-containing protein At2g16880 
 zma-u.5   103632236   pentatricopeptide repeat-containing protein At2g16880 
 tae-r.2   123098366   pentatricopeptide repeat-containing protein At2g16880 
 tae-r.2   123093077   pentatricopeptide repeat-containing protein At2g16880 
 tae-r.2   123084980   pentatricopeptide repeat-containing protein At2g16880 
 hvu-r.1   123449408   pentatricopeptide repeat-containing protein At2g16880-like 
 sbi-r.1   8054235   pentatricopeptide repeat-containing protein At2g16880 
 bdi-r.1   100836927   pentatricopeptide repeat-containing protein At2g16880 

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Top 50 coexpressed genes to 106394376 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106394376 (bna-r.1 coexpression data)

CoexMap"106394376"


bnaLOC106394376 | Entrez gene ID : 106394376    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013690405.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk 1,  nucl_plas 1  (predict for XP_013690405.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013690405.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106394376
bna-r.1
for
106428678
bra-r.6
for
103846017
ath-u.5
for
AT2G16880
ghi-r.1
for
107948968
ghi-r.1
for
121203005
cit-r.1
for
102624240
gma-u.5
for
100808380
vvi-u.5
for
100254777
ppo-u.5
for
7458638
mtr-u.5
for
25484953
sly-u.5
for
104645441
sot-r.1
for
102596368
nta-r.1
for
107790367
nta-r.1
for
107786329
osa-u.5
for
9271741
zma-u.5
for
103632236
tae-r.2
for
123098366
tae-r.2
for
123093077
tae-r.2
for
123084980
hvu-r.1
for
123449408
sbi-r.1
for
8054235
bdi-r.1
for
100836927


Ortholog ID: 11236
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106394376 LOC106428678 LOC103846017 AT2G16880 LOC107948968 LOC121203005 LOC102624240 LOC100808380 LOC100254777 LOC7458638 LOC25484953 LOC104645441 LOC102596368 LOC107790367 LOC107786329 LOC9271741 LOC103632236 LOC123098366 LOC123093077 LOC123084980 LOC123449408 LOC8054235 LOC100836927
Function* pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 uncharacterized LOC107790367 uncharacterized LOC107786329 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880-like pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106394376 106428678 103846017 816189 107948968 121203005 102624240 100808380 100254777 7458638 25484953 104645441 102596368 107790367 107786329 9271741 103632236 123098366 123093077 123084980 123449408 8054235 100836927
The preparation time of this page was 1.8 [sec].