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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790367   uncharacterized LOC107790367 
 sly-u.5   104645441   pentatricopeptide repeat-containing protein At2g16880 
 ath-u.5   AT2G16880   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100808380   pentatricopeptide repeat-containing protein At2g16880 
 vvi-u.5   100254777   pentatricopeptide repeat-containing protein At2g16880 
 ppo-u.5   7458638   pentatricopeptide repeat-containing protein At2g16880 
 mtr-u.5   25484953   pentatricopeptide repeat-containing protein At2g16880 
 osa-u.5   9271741   pentatricopeptide repeat-containing protein At2g16880 
 zma-u.5   103632236   pentatricopeptide repeat-containing protein At2g16880 

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Top 50 coexpressed genes to 107790367 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790367 (nta-r.1 coexpression data)

CoexMap"107790367"


ntaLOC107790367 | Entrez gene ID : 107790367    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016467775.2 [sequence] [blastp]
XP_016467776.2 [sequence] [blastp]
XP_016467777.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_016467775.2)
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_016467776.2)
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_016467777.2)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_016467775.2)
chlo 7,  other 3  (predict for XP_016467776.2)
chlo 7,  other 3  (predict for XP_016467777.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790367
sly-u.5
for
104645441
ath-u.5
for
AT2G16880
gma-u.5
for
100808380
vvi-u.5
for
100254777
ppo-u.5
for
7458638
mtr-u.5
for
25484953
osa-u.5
for
9271741
zma-u.5
for
103632236


Ortholog ID: 11236
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107790367 LOC107786329 LOC104645441 LOC102596368 AT2G16880 LOC100808380 LOC103846017 LOC100254777 LOC7458638 LOC25484953 LOC121203005 LOC107948968 LOC106428678 LOC106394376 LOC102624240 LOC9271741 LOC103632236 LOC123093077 LOC123084980 LOC123449408 LOC8054235 LOC100836927
Function* uncharacterized LOC107790367 uncharacterized LOC107786329 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880-like pentatricopeptide repeat-containing protein At2g16880 pentatricopeptide repeat-containing protein At2g16880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107790367 107786329 104645441 102596368 816189 100808380 103846017 100254777 7458638 25484953 121203005 107948968 106428678 106394376 102624240 9271741 103632236 123093077 123084980 123449408 8054235 100836927
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