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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106396886   pre-mRNA-splicing factor CWC25 homolog 
 ath-u.5   AT2G44200   pre-mRNA splicing factor domain-containing protein 
 gma-u.5   100796664   pre-mRNA-splicing factor CWC25 homolog 
 gma-u.5   100779273   pre-mRNA-splicing factor CWC25 homolog 
 vvi-u.5   100243706   uncharacterized LOC100243706 
 ppo-u.5   7459914   uncharacterized LOC7459914 
 mtr-u.5   11413607   pre-mRNA-splicing factor CWC25 homolog 
 sly-u.5   101253956   uncharacterized LOC101253956 
 osa-u.5   4345946   pre-mRNA-splicing factor CWC25 homolog 
 zma-u.5   100383562   CBF1-interacting co-repressor CIR N-terminal 

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Top 50 coexpressed genes to 106396886 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106396886 (bna-r.1 coexpression data)

CoexMap"106396886"


bnaLOC106396886 | Entrez gene ID : 106396886    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0005684 [list] [network] U2-type spliceosomal complex  (194 genes)  IEA  
GO MF
Protein XP_013692843.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013692843.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013692843.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106396886

.
ath-u.5
for
AT2G44200

.
gma-u.5
for
100796664

.
gma-u.5
for
100779273

.
vvi-u.5
for
100243706

.
ppo-u.5
for
7459914

.
mtr-u.5
for
11413607

.
sly-u.5
for
101253956

.
osa-u.5
for
4345946

.
zma-u.5
for
100383562

.


Ortholog ID: 8427
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G44200 LOC100779273 LOC100796664 LOC101253956 LOC4345946 LOC100383562 LOC103866774 LOC103858123 LOC100243706 LOC7459914 LOC11413607 LOC123165253 LOC123151004 LOC123407172 LOC107903419 LOC107927486 LOC106438213 LOC106396111 CHLRE_01g021400v5 LOC8055210 LOC102581250 LOC102606810 LOC100836983 LOC107791468 LOC107832045
Function* pre-mRNA splicing factor domain-containing protein pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC101253956 pre-mRNA-splicing factor CWC25 homolog CBF1-interacting co-repressor CIR N-terminal pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC100243706 uncharacterized LOC7459914 pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized protein pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC102606810 pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC107791468 uncharacterized LOC107832045
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03250 Viral life cycle - HIV-1 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03420 Nucleotide excision repair 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 5
bna03022 Basal transcription factors 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 5
bna03022 Basal transcription factors 3
bna03040 Spliceosome 3
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819028 100779273 100796664 101253956 4345946 100383562 103866774 103858123 100243706 7459914 11413607 123165253 123151004 123407172 107903419 107927486 106438213 106396111 5715210 8055210 102581250 102606810 100836983 107791468 107832045
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