Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106438213   pre-mRNA-splicing factor CWC25 homolog 
 bna-r.1   106396111   pre-mRNA-splicing factor CWC25 homolog 
 bna-r.1   106396886   pre-mRNA-splicing factor CWC25 homolog 
 bra-r.6   103866774   pre-mRNA-splicing factor CWC25 homolog 
 bra-r.6   103858123   pre-mRNA-splicing factor CWC25 homolog 
 ath-u.5   AT2G44200   pre-mRNA splicing factor domain-containing protein 
 ghi-r.1   107903419   pre-mRNA-splicing factor CWC25 homolog 
 ghi-r.1   107927486   pre-mRNA-splicing factor CWC25 homolog 
 cit-r.1   102606810   uncharacterized LOC102606810 
 gma-u.5   100796664   pre-mRNA-splicing factor CWC25 homolog 
 gma-u.5   100779273   pre-mRNA-splicing factor CWC25 homolog 
 vvi-u.5   100243706   uncharacterized LOC100243706 
 ppo-u.5   7459914   uncharacterized LOC7459914 
 mtr-u.5   11413607   pre-mRNA-splicing factor CWC25 homolog 
 sly-u.5   101253956   uncharacterized LOC101253956 
 sot-r.1   102581250   pre-mRNA-splicing factor CWC25 homolog 
 nta-r.1   107832045   uncharacterized LOC107832045 
 nta-r.1   107791468   uncharacterized LOC107791468 
 osa-u.5   4345946   pre-mRNA-splicing factor CWC25 homolog 
 zma-u.5   100383562   CBF1-interacting co-repressor CIR N-terminal 
 tae-r.2   123161532   pre-mRNA-splicing factor CWC25 homolog 
 tae-r.2   123151004   pre-mRNA-splicing factor CWC25 
 tae-r.2   123165253   pre-mRNA-splicing factor CWC25 homolog 
 hvu-r.1   123407172   pre-mRNA-splicing factor CWC25 homolog 
 sbi-r.1   8055210   pre-mRNA-splicing factor CWC25 homolog 
 bdi-r.1   100836983   pre-mRNA-splicing factor CWC25 homolog 
 cre-r.1   CHLRE_01g021400v5   uncharacterized protein 

close


Top 50 coexpressed genes to 106438213 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106438213 (bna-r.1 coexpression data)

CoexMap"106438213"


bnaLOC106438213 | Entrez gene ID : 106438213    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0005684 [list] [network] U2-type spliceosomal complex  (194 genes)  IEA  
GO MF
Protein XP_013734765.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013734765.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013734765.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106438213
bna-r.1
for
106396111
bna-r.1
for
106396886
bra-r.6
for
103866774
bra-r.6
for
103858123
ath-u.5
for
AT2G44200
ghi-r.1
for
107903419
ghi-r.1
for
107927486
cit-r.1
for
102606810
gma-u.5
for
100796664
gma-u.5
for
100779273
vvi-u.5
for
100243706
ppo-u.5
for
7459914
mtr-u.5
for
11413607
sly-u.5
for
101253956
sot-r.1
for
102581250
nta-r.1
for
107832045
nta-r.1
for
107791468
osa-u.5
for
4345946
zma-u.5
for
100383562
tae-r.2
for
123161532
tae-r.2
for
123151004
tae-r.2
for
123165253
hvu-r.1
for
123407172
sbi-r.1
for
8055210
bdi-r.1
for
100836983
cre-r.1
for
CHLRE_01g021400v5


Ortholog ID: 8427
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106438213 LOC106396111 LOC106396886 LOC103866774 LOC103858123 AT2G44200 LOC107903419 LOC107927486 LOC102606810 LOC100796664 LOC100779273 LOC100243706 LOC7459914 LOC11413607 LOC101253956 LOC102581250 LOC107832045 LOC107791468 LOC4345946 LOC100383562 LOC123161532 LOC123151004 LOC123165253 LOC123407172 LOC8055210 LOC100836983 CHLRE_01g021400v5
Function* pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA splicing factor domain-containing protein pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC102606810 pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC100243706 uncharacterized LOC7459914 pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC101253956 pre-mRNA-splicing factor CWC25 homolog uncharacterized LOC107832045 uncharacterized LOC107791468 pre-mRNA-splicing factor CWC25 homolog CBF1-interacting co-repressor CIR N-terminal pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog pre-mRNA-splicing factor CWC25 homolog uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 5
bna03022 Basal transcription factors 3
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 5
bna03022 Basal transcription factors 3
bna03040 Spliceosome 3
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna03040 Spliceosome 3
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03250 Viral life cycle - HIV-1 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03420 Nucleotide excision repair 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106438213 106396111 106396886 103866774 103858123 819028 107903419 107927486 102606810 100796664 100779273 100243706 7459914 11413607 101253956 102581250 107832045 107791468 4345946 100383562 123161532 123151004 123165253 123407172 8055210 100836983 5715210
The preparation time of this page was 0.2 [sec].