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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106399344   PHD finger-like domain-containing protein 5A 
 bna-r.1   106446981   PHD finger-like domain-containing protein 5A 
 bna-r.1   106391134   PHD finger-like domain-containing protein 5A 
 bna-r.1   106387894   PHD finger-like domain-containing protein 5A 
 bra-r.6   103843972   PHD finger-like domain-containing protein 5A 
 bra-r.6   103865000   PHD finger-like domain-containing protein 5A 
 bra-r.6   103857282   PHD finger-like domain-containing protein 5A 
 ath-u.5   AT2G30000   PHF5-like protein 
 ath-u.5   AT1G07170   PHF5-like protein 
 ghi-r.1   107959035   PHD finger-like domain-containing protein 5A 
 cit-r.1   102627702   PHD finger-like domain-containing protein 5A 
 gma-u.5   100305969   uncharacterized LOC100305969 
 gma-u.5   100777021   PHD finger-like domain-containing protein 5A 
 ppo-u.5   7475011   PHD finger-like domain-containing protein 5A 
 ppo-u.5   7475012   PHD finger-like domain-containing protein 5A 
 mtr-u.5   25490917   PHD finger-like domain-containing protein 5A 
 mtr-u.5   11414620   PHD finger-like domain-containing protein 5A 
 sly-u.5   101247104   PHD finger-like domain-containing protein 5A 
 sot-r.1   102587171   PHD finger-like domain-containing protein 5B 
 nta-r.1   142161608   PHD finger-like domain-containing protein 5A 
 osa-u.5   4337303   PHD finger-like domain-containing protein 5B 
 osa-u.5   4338563   PHD finger-like domain-containing protein 5A 
 zma-u.5   100282173   uncharacterized LOC100282173 
 zma-u.5   100286340   uncharacterized LOC100286340 
 tae-r.2   123148232   PHD finger-like domain-containing protein 5A 
 tae-r.2   123190633   PHD finger-like domain-containing protein 5A 
 tae-r.2   123168453   PHD finger-like domain-containing protein 5A 
 hvu-r.1   123411959   PHD finger-like domain-containing protein 5A 
 hvu-r.1   123428818   zinc finger CCCH domain-containing protein 30-like 
 sbi-r.1   8082552   PHD finger-like domain-containing protein 5B 
 sbi-r.1   8060728   PHD finger-like domain-containing protein 5B 
 bdi-r.1   100828958   PHD finger-like domain-containing protein 5B 
 cre-r.1   CHLRE_05g234648v5   uncharacterized protein 

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Top 50 coexpressed genes to 106399344 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106399344 (bna-r.1 coexpression data)

CoexMap"106399344"


bnaLOC106399344 | Entrez gene ID : 106399344    
Species bna bra ath ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 4 3 2 1 1 2 2 2 1 1 1 2 2 3 2 2 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (61 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (88 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (154 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
Protein XP_013695273.1 [sequence] [blastp]
XP_048599477.1 [sequence] [blastp]
XP_048599478.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_013695273.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_048599477.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_048599478.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013695273.1)
other 8  (predict for XP_048599477.1)
other 8  (predict for XP_048599478.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106399344
bna-r.1
for
106446981
bna-r.1
for
106391134
bna-r.1
for
106387894
bra-r.6
for
103843972
bra-r.6
for
103865000
bra-r.6
for
103857282
ath-u.5
for
AT2G30000
ath-u.5
for
AT1G07170
ghi-r.1
for
107959035
cit-r.1
for
102627702
gma-u.5
for
100305969
gma-u.5
for
100777021
ppo-u.5
for
7475011
ppo-u.5
for
7475012
mtr-u.5
for
25490917
mtr-u.5
for
11414620
sly-u.5
for
101247104
sot-r.1
for
102587171
nta-r.1
for
142161608
osa-u.5
for
4337303
osa-u.5
for
4338563
zma-u.5
for
100282173
zma-u.5
for
100286340
tae-r.2
for
123148232
tae-r.2
for
123190633
tae-r.2
for
123168453
hvu-r.1
for
123411959
hvu-r.1
for
123428818
sbi-r.1
for
8082552
sbi-r.1
for
8060728
bdi-r.1
for
100828958
cre-r.1
for
CHLRE_05g234648v5


Ortholog ID: 3912
Species bna bna bna bra bra bra ath ath cit gma gma ppo ppo ppo mtr mtr sly sot nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC106399344 LOC106391134 LOC106348413 LOC103843972 LOC103865000 LOC103857282 AT2G30000 AT1G07170 LOC102627702 LOC100305969 LOC100777021 LOC7475011 LOC7475012 LOC7496780 LOC25490917 LOC11414620 LOC101247104 LOC102587171 LOC142161608 LOC4337303 LOC4338563 LOC100282173 LOC100286340 LOC123190633 LOC123160901 LOC123046962 LOC123411959 LOC123428818 LOC8082552 LOC8060728 LOC100828958 CHLRE_05g234648v5
Function* PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHF5-like protein PHF5-like protein PHD finger-like domain-containing protein 5A uncharacterized LOC100305969 PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5A uncharacterized LOC100282173 uncharacterized LOC100286340 PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A zinc finger CCCH domain-containing protein 30-like PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00190 Oxidative phosphorylation 3
bra04145 Phagosome 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae00195 Photosynthesis 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106399344 106391134 106348413 103843972 103865000 103857282 817551 837228 102627702 100305969 100777021 7475011 7475012 7496780 25490917 11414620 101247104 102587171 142161608 4337303 4338563 100282173 100286340 123190633 123160901 123046962 123411959 123428818 8082552 8060728 100828958 5726226
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