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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060728   PHD finger-like domain-containing protein 5B 
 zma-u.5   100286340   uncharacterized LOC100286340 
 zma-u.5   100282173   uncharacterized LOC100282173 
 osa-u.5   4337303   PHD finger-like domain-containing protein 5B 
 osa-u.5   4338563   PHD finger-like domain-containing protein 5A 
 ath-u.5   AT2G30000   PHF5-like protein 
 ath-u.5   AT1G07170   PHF5-like protein 
 gma-u.5   100777021   PHD finger-like domain-containing protein 5A 
 gma-u.5   100305969   uncharacterized LOC100305969 
 sly-u.5   101247104   PHD finger-like domain-containing protein 5A 
 ppo-u.5   7496780   PHD finger-like domain-containing protein 5A 
 ppo-u.5   7475012   PHD finger-like domain-containing protein 5A 
 mtr-u.5   11414620   PHD finger-like domain-containing protein 5A 
 mtr-u.5   25490917   PHD finger-like domain-containing protein 5A 

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Top 50 coexpressed genes to 8060728 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060728 (sbi-r.1 coexpression data)

CoexMap"8060728"


sbiLOC8060728 | Entrez gene ID : 8060728    
Species sbi zma osa ath gma sly ppo mtr bra nta cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 2 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (25 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (39 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (61 genes)  IEA  
GO MF
Protein XP_002461532.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_002461532.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002461532.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060728

.
zma-u.5
for
100286340

.
zma-u.5
for
100282173

.
osa-u.5
for
4337303

.
osa-u.5
for
4338563

.
ath-u.5
for
AT2G30000

.
ath-u.5
for
AT1G07170

.
gma-u.5
for
100777021

.
gma-u.5
for
100305969

.
sly-u.5
for
101247104

.
ppo-u.5
for
7496780

.
ppo-u.5
for
7475012

.
mtr-u.5
for
11414620

.
mtr-u.5
for
25490917

.


Ortholog ID: 3912
Species ath ath gma gma sly osa osa zma zma bra bra ppo ppo mtr mtr tae tae hvu hvu bna bna cre sbi sbi sot cit bdi nta
Symbol AT1G07170 AT2G30000 LOC100305969 LOC100777021 LOC101247104 LOC4338563 LOC4337303 LOC100282173 LOC100286340 LOC103857282 LOC103843972 LOC7475011 LOC7475012 LOC11414620 LOC25490917 LOC123046962 LOC123160901 LOC123428818 LOC123411959 LOC106391134 LOC106399344 CHLRE_05g234648v5 LOC8060728 LOC8082552 LOC102587171 LOC102627702 LOC100828958 LOC142161608
Function* PHF5-like protein PHF5-like protein uncharacterized LOC100305969 PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5B uncharacterized LOC100282173 uncharacterized LOC100286340 PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A zinc finger CCCH domain-containing protein 30-like PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5A uncharacterized protein PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5A PHD finger-like domain-containing protein 5B PHD finger-like domain-containing protein 5A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae00195 Photosynthesis 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837228 817551 100305969 100777021 101247104 4338563 4337303 100282173 100286340 103857282 103843972 7475011 7475012 11414620 25490917 123046962 123160901 123428818 123411959 106391134 106399344 5726226 8060728 8082552 102587171 102627702 100828958 142161608
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