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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106401809   general transcription factor 3C polypeptide 2 
 ath-u.5   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100816953   uncharacterized LOC100816953 
 vvi-u.5   100852537   uncharacterized LOC100852537 
 ppo-u.5   7454240   uncharacterized LOC7454240 
 mtr-u.5   25483858   uncharacterized LOC25483858 
 sly-u.5   101256910   uncharacterized LOC101256910 
 osa-u.5   9269796   uncharacterized LOC9269796 
 zma-u.5   103650985   Transducin/WD40 repeat-like superfamily protein 

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Top 50 coexpressed genes to 106401809 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106401809 (bna-r.1 coexpression data)

CoexMap"106401809"


bnaLOC106401809 | Entrez gene ID : 106401809    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (76 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (25 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013697857.2 [sequence] [blastp]
XP_013697861.1 [sequence] [blastp]
XP_048612654.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013697857.2)
chlo 6,  nucl 3,  mito 1,  pero 1  (predict for XP_013697861.1)
nucl 10  (predict for XP_048612654.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013697857.2)
mito 6  (predict for XP_013697861.1)
other 8  (predict for XP_048612654.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106401809
ath-u.5
for
AT1G19485
gma-u.5
for
100816953
vvi-u.5
for
100852537
ppo-u.5
for
7454240
mtr-u.5
for
25483858
sly-u.5
for
101256910
osa-u.5
for
9269796
zma-u.5
for
103650985


Ortholog ID: 7807
Species bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu hvu sbi bdi
Symbol LOC106401809 LOC106440768 LOC103835842 LOC103872752 AT1G19485 LOC107925902 LOC107944108 LOC102609984 LOC100816953 LOC100852537 LOC7454240 LOC25483858 LOC101256910 LOC102605692 LOC107770968 LOC107774390 LOC9269796 LOC103650985 LOC123183150 LOC123062654 LOC123444844 LOC123450562 LOC8062105 LOC100830814
Function* general transcription factor 3C polypeptide 2 uncharacterized LOC106440768 uncharacterized LOC103835842 uncharacterized LOC103872752 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC107925902 uncharacterized LOC107944108 uncharacterized LOC102609984 uncharacterized LOC100816953 uncharacterized LOC100852537 uncharacterized LOC7454240 uncharacterized LOC25483858 uncharacterized LOC101256910 uncharacterized LOC102605692 uncharacterized LOC107770968 uncharacterized LOC107774390 uncharacterized LOC9269796 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC123183150 uncharacterized LOC123062654 uncharacterized LOC123444844 uncharacterized LOC123450562 uncharacterized LOC8062105 uncharacterized LOC100830814
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 4
sly03430 Mismatch repair 2
sly03440 Homologous recombination 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106401809 106440768 103835842 103872752 838534 107925902 107944108 102609984 100816953 100852537 7454240 25483858 101256910 102605692 107770968 107774390 9269796 103650985 123183150 123062654 123444844 123450562 8062105 100830814
The preparation time of this page was 2.7 [sec].