ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAA10G27970D	UDP-xylose transporter 3
bna-r.1	BNAA09G49660D	UDP-xylose transporter 3
bna-r.1	125578635	UDP-xylose transporter 3-like
bna-r.1	106368998	UDP-xylose transporter 3-like
bra-r.6	103844001	UDP-xylose transporter 3
bra-r.6	103843489	UDP-xylose transporter 3
bra-r.6	103836465	UDP-xylose transporter 3
ath-u.5	AT2G30460	Nucleotide/sugar transporter family protein
ath-u.5	AT1G06890	nodulin MtN21 /EamA-like transporter family protein
ghi-r.1	107946919	UDP-xylose transporter 3
ghi-r.1	107932498	UDP-xylose transporter 3
ghi-r.1	107933757	UDP-xylose transporter 3
cit-r.1	102612839	UDP-xylose transporter 3
gma-u.5	100786018	UDP-xylose transporter 2
gma-u.5	100786535	UDP-xylose transporter 3
gma-u.5	100788989	UDP-xylose transporter 3
vvi-u.5	100265566	UDP-xylose transporter 3
vvi-u.5	100262066	UDP-xylose transporter 3
ppo-u.5	7458815	UDP-xylose transporter 3
ppo-u.5	18104687	UDP-xylose transporter 3
mtr-u.5	25489849	UDP-xylose transporter 3
sly-u.5	101245666	UDP-xylose transporter 3-like
sly-u.5	101256094	UDP-xylose transporter 2
sot-r.1	102603522	uncharacterized membrane protein At1g06890-like
sot-r.1	102583124	uncharacterized membrane protein At1g06890-like
nta-r.1	107763583	UDP-xylose transporter 3
nta-r.1	107763924	UDP-xylose transporter 3
nta-r.1	107775038	UDP-xylose transporter 3
osa-u.5	4337925	UDP-xylose transporter 3
osa-u.5	4327569	UDP-xylose transporter 3
osa-u.5	4325183	UDP-xylose transporter 3
zma-u.5	100282172	integral membrane protein like
zma-u.5	100280830	integral membrane protein like
zma-u.5	100274586	putative integral membrane protein
tae-r.2	123180640	UDP-xylose transporter 3
tae-r.2	123060304	UDP-xylose transporter 3
tae-r.2	123077316	UDP-xylose transporter 3
hvu-r.1	123426495	UDP-xylose transporter 3-like
hvu-r.1	123442833	UDP-xylose transporter 3-like
sbi-r.1	110434035	UDP-xylose transporter 3-like
sbi-r.1	8080933	UDP-xylose transporter 3
bdi-r.1	100825509	UDP-xylose transporter 3
bdi-r.1	100844882	UDP-xylose transporter 3
cre-r.1	CHLRE_17g710850v5	uncharacterized protein
cre-r.1	CHLRE_15g641266v5	uncharacterized protein

Top 50 coexpressed genes to BNAA10G27970D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAA10G27970D (bna-r.1 coexpression data)

CoexMap"106402056"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(1586 genes)

IEA

GO MF

GO:0005464 [list] [network] UDP-xylose transmembrane transporter activity	(15 genes)	IEA
GO:0015297 [list] [network] antiporter activity	(574 genes)	IEA

Protein

XP_013698150.2 [sequence] [blastp]
XP_013698151.2 [sequence] [blastp]
XP_013698152.2 [sequence] [blastp]
XP_013698153.2 [sequence] [blastp]
XP_022559287.2 [sequence] [blastp]
XP_022559288.2 [sequence] [blastp]
XP_048613800.1 [sequence] [blastp]
XP_048613801.1 [sequence] [blastp]
XP_048613802.1 [sequence] [blastp]
XP_048613804.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_013698150.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_013698151.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_013698152.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_013698153.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_022559287.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_022559288.2)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_048613800.1)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_048613801.1)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_048613802.1)
plas 5, vacu 2, extr 1, cyto 1, golg 1	(predict for XP_048613804.1)

Subcellular
localization
TargetP

scret 6, other 4	(predict for XP_013698150.2)
scret 6, other 4	(predict for XP_013698151.2)
scret 6, other 4	(predict for XP_013698152.2)
scret 6, other 4	(predict for XP_013698153.2)
scret 6, other 4	(predict for XP_022559287.2)
scret 6, other 4	(predict for XP_022559288.2)
scret 6, other 4	(predict for XP_048613800.1)
scret 6, other 4	(predict for XP_048613801.1)
scret 6, other 4	(predict for XP_048613802.1)
scret 6, other 4	(predict for XP_048613804.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAA10G27970D	bna-r.1 for BNAA09G49660D	bna-r.1 for 125578635	bna-r.1 for 106368998	bra-r.6 for 103844001	bra-r.6 for 103843489	bra-r.6 for 103836465	ath-u.5 for AT2G30460	ath-u.5 for AT1G06890	ghi-r.1 for 107946919	ghi-r.1 for 107932498	ghi-r.1 for 107933757	cit-r.1 for 102612839	gma-u.5 for 100786018	gma-u.5 for 100786535	gma-u.5 for 100788989	vvi-u.5 for 100265566	vvi-u.5 for 100262066	ppo-u.5 for 7458815	ppo-u.5 for 18104687	mtr-u.5 for 25489849	sly-u.5 for 101245666	sly-u.5 for 101256094	sot-r.1 for 102603522	sot-r.1 for 102583124	nta-r.1 for 107763583	nta-r.1 for 107763924	nta-r.1 for 107775038	osa-u.5 for 4337925	osa-u.5 for 4327569	osa-u.5 for 4325183	zma-u.5 for 100282172	zma-u.5 for 100280830	zma-u.5 for 100274586	tae-r.2 for 123180640	tae-r.2 for 123060304	tae-r.2 for 123077316	hvu-r.1 for 123426495	hvu-r.1 for 123442833	sbi-r.1 for 110434035	sbi-r.1 for 8080933	bdi-r.1 for 100825509	bdi-r.1 for 100844882	cre-r.1 for CHLRE_17g710850v5	cre-r.1 for CHLRE_15g641266v5

Ortholog

Ortholog ID: 2796

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

UDP-xylose transporter 3

UDP-xylose transporter 3-like

UDP-xylose transporter 3

Nucleotide/sugar transporter family protein

nodulin MtN21 /EamA-like transporter family protein

UDP-xylose transporter 3

UDP-xylose transporter 2

UDP-xylose transporter 3

UDP-xylose transporter 3-like

UDP-xylose transporter 2

uncharacterized membrane protein At1g06890-like

UDP-xylose transporter 3

integral membrane protein like

putative integral membrane protein

Nucleotide/sugar transporter family protein

UDP-xylose transporter 3

UDP-xylose transporter 3-like

UDP-xylose transporter 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	5
bra01250	Biosynthesis of nucleotide sugars	4
bra04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra04712	Circadian rhythm - plant	3
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	4
gma00510	N-Glycan biosynthesis	2
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	5
sly04141	Protein processing in endoplasmic reticulum	5
sly00513	Various types of N-glycan biosynthesis	4
sly00020	Citrate cycle (TCA cycle)	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	7
sot01240	Biosynthesis of cofactors	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	6
nta04981	Folate transport and metabolism	4
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	4
nta01240	Biosynthesis of cofactors	4
nta02010	ABC transporters	2
nta00230	Purine metabolism	2
nta00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00531	Glycosaminoglycan degradation	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6
tae01250	Biosynthesis of nucleotide sugars	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6
tae01250	Biosynthesis of nucleotide sugars	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04144	Endocytosis	3
hvu00071	Fatty acid degradation	2
hvu00280	Valine, leucine and isoleucine degradation	2
hvu00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	4
cre00510	N-Glycan biosynthesis	3
cre01250	Biosynthesis of nucleotide sugars	2
cre00513	Various types of N-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

106402056

125591417

106362220

103844001

103843489

103836465

817596

837199

107946919

107932498

107933757

102612839

100786018

100786535

100789517

100265566

100262066

7458815

18104687

25489849

101245666

101256094

102603522

102583124

107775038

107799060

107761216

4337925

4327569

4325183

100282172

100274586

100274338

123180640

123060304

123068816

123426495

123442833

110434035

8080933

100825509

100844882

5717129

5728625

The preparation time of this page was 0.1 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	1	3	2	2	1	2	2	3	3	3	3	2	2	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAA10G27970D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAA10G27970D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**