ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25489849	UDP-xylose transporter 3
mtr-r.5	25489849	UDP-xylose transporter 3
gma-u.5	100786018	UDP-xylose transporter 2
gma-u.5	100786535	UDP-xylose transporter 3
gma-u.5	100788989	UDP-xylose transporter 3
ppo-u.5	7458815	UDP-xylose transporter 3
ppo-u.5	18104687	UDP-xylose transporter 3
ath-u.5	AT2G30460	Nucleotide/sugar transporter family protein
ath-u.5	AT1G06890	nodulin MtN21 /EamA-like transporter family protein
vvi-u.5	100265566	UDP-xylose transporter 3
vvi-u.5	100262066	UDP-xylose transporter 3
sly-u.5	101245666	UDP-xylose transporter 3-like
sly-u.5	101256094	UDP-xylose transporter 2
osa-u.5	4337925	UDP-xylose transporter 3
osa-u.5	4327569	UDP-xylose transporter 3
osa-u.5	4325183	UDP-xylose transporter 3
zma-u.5	100282172	integral membrane protein like
zma-u.5	100280830	integral membrane protein like
zma-u.5	100274586	putative integral membrane protein

Top 50 coexpressed genes to 25489849 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25489849 (mtr-u.5 coexpression data)

CoexMap"25489849"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013461534.1 [sequence] [blastp]
XP_039687636.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, plas 2, cyto_nucl 2, chlo 1, vacu 1, E.R._plas 1, cyto_plas 1	(predict for XP_013461534.1)
nucl 4, plas 2, cyto_nucl 2, chlo 1, vacu 1, E.R._plas 1, cyto_plas 1	(predict for XP_039687636.1)

Subcellular
localization
TargetP

other 7	(predict for XP_013461534.1)
other 7	(predict for XP_039687636.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25489849	mtr-r.5 for 25489849	gma-u.5 for 100786018	gma-u.5 for 100786535	gma-u.5 for 100788989	ppo-u.5 for 7458815	ppo-u.5 for 18104687	ath-u.5 for AT2G30460	ath-u.5 for AT1G06890	vvi-u.5 for 100265566	vvi-u.5 for 100262066	sly-u.5 for 101245666	sly-u.5 for 101256094	osa-u.5 for 4337925	osa-u.5 for 4327569	osa-u.5 for 4325183	zma-u.5 for 100282172	zma-u.5 for 100280830	zma-u.5 for 100274586

Ortholog

Ortholog ID: 2796

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

UDP-xylose transporter 3

UDP-xylose transporter 2

UDP-xylose transporter 3

nodulin MtN21 /EamA-like transporter family protein

Nucleotide/sugar transporter family protein

UDP-xylose transporter 3

UDP-xylose transporter 2

UDP-xylose transporter 3-like

uncharacterized membrane protein At1g06890-like

UDP-xylose transporter 3

integral membrane protein like

putative integral membrane protein

UDP-xylose transporter 3

UDP-xylose transporter 3-like

UDP-xylose transporter 3

UDP-xylose transporter 3-like

UDP-xylose transporter 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	4
gma00510	N-Glycan biosynthesis	2
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra04712	Circadian rhythm - plant	3
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	5
sly04141	Protein processing in endoplasmic reticulum	5
sly00513	Various types of N-glycan biosynthesis	4
sly00020	Citrate cycle (TCA cycle)	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	7
sot01240	Biosynthesis of cofactors	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	4
nta01240	Biosynthesis of cofactors	4
nta02010	ABC transporters	2
nta00230	Purine metabolism	2
nta00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	6
nta04981	Folate transport and metabolism	4
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6
tae01250	Biosynthesis of nucleotide sugars	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04144	Endocytosis	3
hvu00071	Fatty acid degradation	2
hvu00280	Valine, leucine and isoleucine degradation	2
hvu00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	4
cre00510	N-Glycan biosynthesis	3
cre01250	Biosynthesis of nucleotide sugars	2
cre00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	7

Expression

Expression pattern

Entrez Gene ID^*

25489849

100789517

100786018

18104687

7458815

837199

817596

103836465

103843489

100265566

100262066

107933757

107932498

106402056

106362220

102612839

101256094

101245666

102603522

102583124

107799060

107775038

4337925

4325183

100282172

100274586

123060304

123180640

123442833

123426495

8080933

110434035

100844882

100825509

5728625

5717129

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	2	2	2	2	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25489849 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25489849 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**