Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106403870   pentatricopeptide repeat-containing protein At4g21880, mitochondrial-like 
 ath-u.5   AT4G04790   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT4G21880   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100790259   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 vvi-u.5   100250302   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 ppo-u.5   7454408   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 ppo-u.5   18095898   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 mtr-u.5   11446150   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 mtr-u.5   11410691   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 sly-u.5   101258770   pentatricopeptide repeat-containing protein 
 osa-u.5   4328206   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 
 zma-u.5   103626578   pentatricopeptide repeat-containing protein At4g04790, mitochondrial 

close


Top 50 coexpressed genes to 106403870 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106403870 (bna-r.1 coexpression data)

CoexMap"106403870"


bnaLOC106403870 | Entrez gene ID : 106403870    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013700108.1 [sequence] [blastp]
XP_013700112.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo_mito 3,  chlo 3,  mito 3,  cyto_mito 1  (predict for XP_013700108.1)
nucl 4,  chlo_mito 3,  chlo 3,  mito 3,  cyto_mito 1  (predict for XP_013700112.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_013700108.1)
mito 7  (predict for XP_013700112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106403870
ath-u.5
for
AT4G04790
ath-u.5
for
AT4G21880
gma-u.5
for
100790259
vvi-u.5
for
100250302
ppo-u.5
for
7454408
ppo-u.5
for
18095898
mtr-u.5
for
11446150
mtr-u.5
for
11410691
sly-u.5
for
101258770
osa-u.5
for
4328206
zma-u.5
for
103626578


Ortholog ID: 5534
Species bna bna bra bra ath ath ghi ghi cit gma vvi ppo ppo mtr sly sot nta osa zma tae tae hvu sbi bdi
Symbol LOC106403870 LOC106416180 LOC103839815 LOC103859553 AT4G21880 AT4G04790 LOC107928609 LOC107916525 LOC102610475 LOC100306302 LOC100250302 LOC18095898 LOC7454408 LOC11410691 LOC101258770 LOC102600742 LOC107794472 LOC4328206 LOC103626578 LOC123136097 LOC123132071 LOC123401633 LOC8069932 LOC100830343
Function* pentatricopeptide repeat-containing protein At4g21880, mitochondrial-like pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g21880, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like pentatricopeptide repeat-containing protein At4g04790, mitochondrial pentatricopeptide repeat-containing protein At4g04790, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr04145 Phagosome 3
mtr04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 3
sly03022 Basal transcription factors 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106403870 106416180 103839815 103859553 828277 825816 107928609 107916525 102610475 100306302 100250302 18095898 7454408 11410691 101258770 102600742 107794472 4328206 103626578 123136097 123132071 123401633 8069932 100830343
The preparation time of this page was 0.1 [sec].