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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106404282   transcription initiation factor TFIID subunit 15 
 bna-r.1   106406267   transcription initiation factor TFIID subunit 15-like 
 bna-r.1   106439038   transcription initiation factor TFIID subunit 15 
 bna-r.1   106416389   transcription initiation factor TFIID subunit 15-like 
 bra-r.6   103832884   transcription initiation factor TFIID subunit 15 
 bra-r.6   103871357   transcription initiation factor TFIID subunit 15 
 ath-u.5   TAF15   TBP-associated factor 15 
 ghi-r.1   107903634   transcription initiation factor TFIID subunit 15 
 ghi-r.1   107922565   transcription initiation factor TFIID subunit 15 
 ghi-r.1   107920484   transcription initiation factor TFIID subunit 15 
 cit-r.1   102616121   transcription initiation factor TFIID subunit 15 
 gma-u.5   100793376   transcription initiation factor TFIID subunit 15 
 gma-u.5   100780819   RNA recognition motif and zinc finger domain-containing protein 
 vvi-u.5   100249627   transcription initiation factor TFIID subunit 15 
 ppo-u.5   7498166   transcription initiation factor TFIID subunit 15 
 ppo-u.5   7481594   transcription initiation factor TFIID subunit 15 
 mtr-u.5   25492824   transcription initiation factor TFIID subunit 15 
 sly-u.5   101259398   transcription initiation factor TFIID subunit 15 
 sot-r.1   102585899   transcription initiation factor TFIID subunit 15 
 nta-r.1   107794760   transcription initiation factor TFIID subunit 15 
 nta-r.1   107808208   transcription initiation factor TFIID subunit 15 
 osa-u.5   4342966   transcription initiation factor TFIID subunit 15 
 osa-u.5   4346663   transcription initiation factor TFIID subunit 15 
 zma-u.5   103647642   transcription initiation factor TFIID subunit 15 
 zma-u.5   103633132   transcription initiation factor TFIID subunit 15 
 tae-r.2   123111663   transcription initiation factor TFIID subunit 15 
 tae-r.2   123103461   transcription initiation factor TFIID subunit 15 
 tae-r.2   123121150   transcription initiation factor TFIID subunit 15 
 hvu-r.1   123396356   transcription initiation factor TFIID subunit 15 
 sbi-r.1   8077228   transcription initiation factor TFIID subunit 15 
 bdi-r.1   100833358   transcription initiation factor TFIID subunit 15 
 cre-r.1   CHLRE_07g328400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106404282 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106404282 (bna-r.1 coexpression data)

CoexMap"106404282"


bnaLOC106404282 | Entrez gene ID : 106404282    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 1 2 1 1 1 2 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_022559968.2 [sequence] [blastp]
XP_048617666.1 [sequence] [blastp]
XP_048617667.1 [sequence] [blastp]
XP_048617668.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  nucl 2,  chlo 1  (predict for XP_022559968.2)
nucl 5,  extr 2,  chlo 1,  cyto 1,  mito 1  (predict for XP_048617666.1)
extr 6,  nucl 2,  chlo 1  (predict for XP_048617667.1)
extr 6,  nucl 2,  chlo 1  (predict for XP_048617668.1)
Subcellular
localization
TargetP
other 7  (predict for XP_022559968.2)
other 7  (predict for XP_048617666.1)
other 7  (predict for XP_048617667.1)
other 7  (predict for XP_048617668.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106404282
bna-r.1
for
106406267
bna-r.1
for
106439038
bna-r.1
for
106416389
bra-r.6
for
103832884
bra-r.6
for
103871357
ath-u.5
for
TAF15
ghi-r.1
for
107903634
ghi-r.1
for
107922565
ghi-r.1
for
107920484
cit-r.1
for
102616121
gma-u.5
for
100793376
gma-u.5
for
100780819
vvi-u.5
for
100249627
ppo-u.5
for
7498166
ppo-u.5
for
7481594
mtr-u.5
for
25492824
sly-u.5
for
101259398
sot-r.1
for
102585899
nta-r.1
for
107794760
nta-r.1
for
107808208
osa-u.5
for
4342966
osa-u.5
for
4346663
zma-u.5
for
103647642
zma-u.5
for
103633132
tae-r.2
for
123111663
tae-r.2
for
123103461
tae-r.2
for
123121150
hvu-r.1
for
123396356
sbi-r.1
for
8077228
bdi-r.1
for
100833358
cre-r.1
for
CHLRE_07g328400v5


Ortholog ID: 6419
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106406267 LOC106439038 LOC106416389 LOC103832884 LOC103871357 TAF15 LOC107903634 LOC107922565 LOC107920484 LOC102616121 LOC100793376 LOC100780819 LOC100249627 LOC7498166 LOC7481594 LOC25492824 LOC101259398 LOC102585899 LOC107794760 LOC107808208 LOC4342966 LOC4346663 LOC103647642 LOC103633132 LOC123111663 LOC123103461 LOC123121150 LOC123396356 LOC8077228 LOC100833358 CHLRE_07g328400v5
Function* transcription initiation factor TFIID subunit 15-like transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15-like transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 TBP-associated factor 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 RNA recognition motif and zinc finger domain-containing protein transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03250 Viral life cycle - HIV-1 4
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 3
ghi03015 mRNA surveillance pathway 3
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03015 mRNA surveillance pathway 2
zma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 13
cre03013 Nucleocytoplasmic transport 3
cre03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406267 106439038 106416389 103832884 103871357 841452 107903634 107922565 107920484 102616121 100793376 100780819 100249627 7498166 7481594 25492824 101259398 102585899 107794760 107808208 4342966 4346663 103647642 103633132 123111663 123103461 123121150 123396356 8077228 100833358 66054044
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