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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7481594   transcription initiation factor TFIID subunit 15 
 ppo-r.4   7481594   transcription initiation factor TFIID subunit 15 
 ppo-m.4   7481594   transcription initiation factor TFIID subunit 15 
 ppo-u.5   7498166   transcription initiation factor TFIID subunit 15 
 gma-u.5   100793376   transcription initiation factor TFIID subunit 15 
 gma-u.5   100780819   RNA recognition motif and zinc finger domain-containing protein 
 mtr-u.5   25492824   transcription initiation factor TFIID subunit 15 
 ath-u.5   TAF15   TBP-associated factor 15 
 vvi-u.5   100249627   transcription initiation factor TFIID subunit 15 
 sly-u.5   101259398   transcription initiation factor TFIID subunit 15 
 osa-u.5   4342966   transcription initiation factor TFIID subunit 15 
 osa-u.5   4346663   transcription initiation factor TFIID subunit 15 
 zma-u.5   103647642   transcription initiation factor TFIID subunit 15 
 zma-u.5   103633132   transcription initiation factor TFIID subunit 15 

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Top 50 coexpressed genes to 7481594 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7481594 (ppo-u.5 coexpression data)

CoexMap"7481594"


ppoLOC7481594 | Entrez gene ID : 7481594    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002315063.1 [sequence] [blastp]
XP_052312667.1 [sequence] [blastp]
XP_052312668.1 [sequence] [blastp]
XP_052312669.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  extr 2,  mito 1,  chlo 1,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002315063.1)
nucl 5,  extr 2,  mito 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for XP_052312667.1)
nucl 5,  extr 2,  mito 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for XP_052312668.1)
nucl 8,  cyto 1  (predict for XP_052312669.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002315063.1)
other 8  (predict for XP_052312667.1)
other 8  (predict for XP_052312668.1)
other 9  (predict for XP_052312669.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7481594

.
ppo-r.4
for
7481594

.
ppo-m.4
for
7481594

.
ppo-u.5
for
7498166

.
gma-u.5
for
100793376

.
gma-u.5
for
100780819

.
mtr-u.5
for
25492824

.
ath-u.5
for
TAF15

.
vvi-u.5
for
100249627

.
sly-u.5
for
101259398

.
osa-u.5
for
4342966

.
osa-u.5
for
4346663

.
zma-u.5
for
103647642

.
zma-u.5
for
103633132

.


Ortholog ID: 6419
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TAF15 LOC100780819 LOC100793376 LOC101259398 LOC4346663 LOC4342966 LOC103647642 LOC103633132 LOC103832884 LOC103871357 LOC100249627 LOC7498166 LOC7481594 LOC25492824 LOC123103461 LOC123111663 LOC123396356 LOC107920484 LOC107922565 LOC106416389 LOC106406267 CHLRE_07g328400v5 LOC8077228 LOC102585899 LOC102616121 LOC100833358 LOC107794760 LOC107808208
Function* TBP-associated factor 15 RNA recognition motif and zinc finger domain-containing protein transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15-like transcription initiation factor TFIID subunit 15-like uncharacterized protein transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03015 mRNA surveillance pathway 2
zma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 3
ghi03015 mRNA surveillance pathway 3
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03250 Viral life cycle - HIV-1 4
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 13
cre03013 Nucleocytoplasmic transport 3
cre03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841452 100780819 100793376 101259398 4346663 4342966 103647642 103633132 103832884 103871357 100249627 7498166 7481594 25492824 123103461 123111663 123396356 107920484 107922565 106416389 106406267 66054044 8077228 102585899 102616121 100833358 107794760 107808208
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