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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106405486   ubiquitin-conjugating enzyme E2 3 
 ath-u.5   UBC2   ubiquiting-conjugating enzyme 2 
 ath-u.5   UBC3   ubiquitin-conjugating enzyme 3 
 ath-u.5   UBC1   ubiquitin carrier protein 1 
 gma-u.5   100499775   uncharacterized LOC100499775 
 gma-u.5   100802605   ubiquitin-conjugating enzyme E2 2 
 gma-u.5   100784962   ubiquitin-conjugating enzyme E2 2 
 vvi-u.5   100242801   ubiquitin-conjugating enzyme E2 2 
 vvi-u.5   UBC2   ubiquitin-conjugating enzyme E2 A 
 vvi-u.5   100246805   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   18105807   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   7489696   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   7469898   ubiquitin-conjugating enzyme E2 2 
 mtr-u.5   25502755   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   101265795   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   101247803   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   UBC1   E2 ubiquitin-conjugating enzyme 
 osa-u.5   4342488   ubiquitin-conjugating enzyme E2 2 
 osa-u.5   4337993   ubiquitin-conjugating enzyme E2 2 
 osa-u.5   4334386   ubiquitin-conjugating enzyme E2 2 
 zma-u.5   100284762   uncharacterized LOC100284762 
 zma-u.5   100283749   uncharacterized LOC100283749 
 zma-u.5   100280476   ubiquitin-conjugating enzyme E2-17 kDa 

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Top 50 coexpressed genes to 106405486 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106405486 (bna-r.1 coexpression data)

CoexMap"106405486"


bnaLOC106405486 | Entrez gene ID : 106405486    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 3 3 3 3 1 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO CC
GO MF
Protein XP_013701465.1 [sequence] [blastp]
XP_013701471.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1  (predict for XP_013701465.1)
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1  (predict for XP_013701471.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_013701465.1)
mito 5,  other 5  (predict for XP_013701471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106405486

.
ath-u.5
for
UBC2

.
ath-u.5
for
UBC3

.
ath-u.5
for
UBC1

.
gma-u.5
for
100499775

.
gma-u.5
for
100802605

.
gma-u.5
for
100784962

.
vvi-u.5
for
100242801

.
vvi-u.5
for
UBC2

.
vvi-u.5
for
100246805

.
ppo-u.5
for
18105807

.
ppo-u.5
for
7489696

.
ppo-u.5
for
7469898

.
mtr-u.5
for
25502755

.
sly-u.5
for
101265795

.
sly-u.5
for
101247803

.
sly-u.5
for
UBC1

.
osa-u.5
for
4342488

.
osa-u.5
for
4337993

.
osa-u.5
for
4334386

.
zma-u.5
for
100284762

.
zma-u.5
for
100283749

.
zma-u.5
for
100280476

.


Ortholog ID: 821
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol UBC3 UBC1 LOC100803594 LOC100802605 LOC101247803 LOC101265795 LOC4334386 LOC4337993 LOC100192052 LOC100284762 LOC103827507 LOC103842970 LOC100246805 UBC2 LOC7469898 LOC7489696 LOC25502755 LOC123052806 LOC123068943 LOC123427116 LOC123426150 LOC107946502 LOC107920403 LOC125574919 LOC106432529 CHLRE_06g294850v5 LOC8060700 LOC8084377 LOC102583372 LOC102593648 LOC102628134 LOC102610592 LOC100826690 LOC100845428 LOC107772211 LOC107812668
Function* ubiquitin-conjugating enzyme 3 ubiquitin carrier protein 1 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 Ubiquitin-conjugating enzyme E2 2 uncharacterized LOC100284762 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 1 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 A ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 3 ubiquitin-conjugating enzyme E2 2-like uncharacterized protein ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma04130 SNARE interactions in vesicular transport 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
sly03050 Proteasome 4
sly03013 Nucleocytoplasmic transport 2
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04120 Ubiquitin mediated proteolysis 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04142 Lysosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03083 Polycomb repressive complex 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03083 Polycomb repressive complex 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03083 Polycomb repressive complex 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae00900 Terpenoid backbone biosynthesis 3
tae04144 Endocytosis 3
tae04814 Motor proteins 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 7
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04130 SNARE interactions in vesicular transport 3
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03010 Ribosome 2
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre00190 Oxidative phosphorylation 2
cre04142 Lysosome 2
cre04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 8
cit03083 Polycomb repressive complex 6
cit04141 Protein processing in endoplasmic reticulum 6
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 9
nta03083 Polycomb repressive complex 6
nta04141 Protein processing in endoplasmic reticulum 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836374 838002 100803594 100802605 101247803 101265795 4334386 4337993 100192052 100284762 103827507 103842970 100246805 100265550 7469898 7489696 25502755 123052806 123068943 123427116 123426150 107946502 107920403 125574919 106432529 5727129 8060700 8084377 102583372 102593648 102628134 102610592 100826690 100845428 107772211 107812668
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