ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106406689	uncharacterized LOC106406689
bna-r.1	111197997	uncharacterized LOC111197997
bna-r.1	106389827	uncharacterized LOC106389827
bna-r.1	125604090	uncharacterized LOC125604090
bra-r.6	103835014	uncharacterized LOC103835014
bra-r.6	103863524	uncharacterized LOC103863524
bra-r.6	103839293	uncharacterized LOC103839293
ath-u.5	AT4G37080	ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)
ath-u.5	AT5G42690	transcription factor, putative (Protein of unknown function, DUF547)
ghi-r.1	107940673	uncharacterized LOC107940673
ghi-r.1	107945407	uncharacterized LOC107945407
ghi-r.1	107940299	uncharacterized LOC107940299
cit-r.1	102623920	uncharacterized LOC102623920
cit-r.1	102630693	uncharacterized LOC102630693
gma-u.5	100794704	uncharacterized LOC100794704
gma-u.5	100801978	uncharacterized LOC100801978
gma-u.5	100807554	uncharacterized LOC100807554
vvi-u.5	100266128	uncharacterized LOC100266128
vvi-u.5	100256691	uncharacterized LOC100256691
ppo-u.5	7483129	uncharacterized LOC7483129
ppo-u.5	18104939	uncharacterized LOC18104939
mtr-u.5	11417890	uncharacterized LOC11417890
mtr-u.5	11415527	uncharacterized LOC11415527
mtr-u.5	11431804	uncharacterized LOC11431804
sly-u.5	101247483	uncharacterized LOC101247483
sly-u.5	101262306	uncharacterized LOC101262306
sot-r.1	102586986	uncharacterized LOC102586986
sot-r.1	102581774	uncharacterized LOC102581774
nta-r.1	107823312	uncharacterized LOC107823312
nta-r.1	107827904	uncharacterized LOC107827904
nta-r.1	107768084	uncharacterized LOC107768084
osa-u.5	9267781	uncharacterized LOC9267781
osa-u.5	4347301	uncharacterized LOC4347301
zma-u.5	109940910	rho GTPase-activating protein 7
zma-u.5	100304433	uncharacterized LOC100304433
zma-u.5	103647498	Ternary complex factor MIP1-like protein
tae-r.2	123112249	uncharacterized LOC123112249
tae-r.2	123121767	uncharacterized LOC123121767
tae-r.2	123104016	uncharacterized LOC123104016
hvu-r.1	123398847	uncharacterized LOC123398847
sbi-r.1	8083240	uncharacterized LOC8083240
sbi-r.1	8083554	uncharacterized LOC8083554
bdi-r.1	100826809	uncharacterized LOC100826809

Top 50 coexpressed genes to 106406689 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106406689 (bna-r.1 coexpression data)

CoexMap"106406689"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013702846.2 [sequence] [blastp]
XP_013702849.2 [sequence] [blastp]
XP_013702850.2 [sequence] [blastp]
XP_022551828.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 3	(predict for XP_013702846.2)
chlo 4, nucl 3, mito 3	(predict for XP_013702849.2)
chlo 4, nucl 3, mito 3	(predict for XP_013702850.2)
chlo 4, nucl 3, mito 3	(predict for XP_022551828.2)

Subcellular
localization
TargetP

chlo 9	(predict for XP_013702846.2)
chlo 9	(predict for XP_013702849.2)
chlo 9	(predict for XP_013702850.2)
chlo 9	(predict for XP_022551828.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106406689	bna-r.1 for 111197997	bna-r.1 for 106389827	bna-r.1 for 125604090	bra-r.6 for 103835014	bra-r.6 for 103863524	bra-r.6 for 103839293	ath-u.5 for AT4G37080	ath-u.5 for AT5G42690	ghi-r.1 for 107940673	ghi-r.1 for 107945407	ghi-r.1 for 107940299	cit-r.1 for 102623920	cit-r.1 for 102630693	gma-u.5 for 100794704	gma-u.5 for 100801978	gma-u.5 for 100807554	vvi-u.5 for 100266128	vvi-u.5 for 100256691	ppo-u.5 for 7483129	ppo-u.5 for 18104939	mtr-u.5 for 11417890	mtr-u.5 for 11415527	mtr-u.5 for 11431804	sly-u.5 for 101247483	sly-u.5 for 101262306	sot-r.1 for 102586986	sot-r.1 for 102581774	nta-r.1 for 107823312	nta-r.1 for 107827904	nta-r.1 for 107768084	osa-u.5 for 9267781	osa-u.5 for 4347301	zma-u.5 for 109940910	zma-u.5 for 100304433	zma-u.5 for 103647498	tae-r.2 for 123112249	tae-r.2 for 123121767	tae-r.2 for 123104016	hvu-r.1 for 123398847	sbi-r.1 for 8083240	sbi-r.1 for 8083554	bdi-r.1 for 100826809

Ortholog

Ortholog ID: 2577

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC106406689

uncharacterized LOC111197997

uncharacterized LOC106389827

uncharacterized LOC103835014

uncharacterized LOC103863524

uncharacterized LOC103839293

ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)

transcription factor, putative (Protein of unknown function, DUF547)

uncharacterized LOC107940673

uncharacterized LOC107901482

uncharacterized LOC107958094

uncharacterized LOC102623920

uncharacterized LOC102630693

uncharacterized LOC100794704

uncharacterized LOC100814669

uncharacterized LOC100818982

uncharacterized LOC100266128

uncharacterized LOC100256691

uncharacterized LOC7483129

uncharacterized LOC18104939

uncharacterized LOC11417890

uncharacterized LOC11431804

uncharacterized LOC11406128

uncharacterized LOC101247483

uncharacterized LOC101262306

uncharacterized LOC102586986

uncharacterized LOC102581774

uncharacterized LOC107827904

uncharacterized LOC107768084

uncharacterized LOC107811204

uncharacterized LOC9267781

uncharacterized LOC4347301

rho GTPase-activating protein 7

uncharacterized LOC100304433

Ternary complex factor MIP1-like protein

uncharacterized LOC123112249

uncharacterized LOC123121767

uncharacterized LOC123104016

uncharacterized LOC123398847

uncharacterized LOC8083240

uncharacterized LOC8083554

uncharacterized LOC100826809

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04145	Phagosome	2
zma04517	IgSF CAM signaling	2
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00620	Pyruvate metabolism	2
hvu00630	Glyoxylate and dicarboxylate metabolism	2
hvu01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106406689

111197997

106389827

103835014

103863524

103839293

829862

834278

107940673

107901482

107958094

102623920

102630693

100794704

100814669

100818982

100266128

100256691

7483129

18104939

11417890

11431804

11406128

101247483

101262306

102586986

102581774

107827904

107768084

107811204

9267781

4347301

109940910

100304433

103647498

123112249

123121767

123104016

123398847

8083240

8083554

100826809

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	2	3	2	2	3	2	3	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106406689 (bna-r.1 coexpression data)

Top 50 enrichment test to 106406689 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**