ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8083554	uncharacterized LOC8083554
sbi-r.1	8083240	uncharacterized LOC8083240
zma-u.5	109940910	rho GTPase-activating protein 7
zma-u.5	103647498	Ternary complex factor MIP1-like protein
zma-u.5	100304433	uncharacterized LOC100304433
osa-u.5	9267781	uncharacterized LOC9267781
osa-u.5	4347301	uncharacterized LOC4347301
tae-r.2	123112249	uncharacterized LOC123112249
tae-r.2	123121767	uncharacterized LOC123121767
tae-r.2	123104016	uncharacterized LOC123104016
hvu-r.1	123398847	uncharacterized LOC123398847
bdi-r.1	100826809	uncharacterized LOC100826809
ath-u.5	AT4G37080	ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)
ath-u.5	AT5G42690	transcription factor, putative (Protein of unknown function, DUF547)
gma-u.5	100794704	uncharacterized LOC100794704
gma-u.5	100801978	uncharacterized LOC100801978
gma-u.5	100807554	uncharacterized LOC100807554
sly-u.5	101262306	uncharacterized LOC101262306
sly-u.5	101247483	uncharacterized LOC101247483
bra-r.6	103835014	uncharacterized LOC103835014
bra-r.6	103839293	uncharacterized LOC103839293
bra-r.6	103863524	uncharacterized LOC103863524
vvi-u.5	100266128	uncharacterized LOC100266128
vvi-u.5	100256691	uncharacterized LOC100256691
ppo-u.5	18104939	uncharacterized LOC18104939
ppo-u.5	7483129	uncharacterized LOC7483129
mtr-u.5	11431804	uncharacterized LOC11431804
mtr-u.5	11406128	uncharacterized LOC11406128
mtr-u.5	11417890	uncharacterized LOC11417890
ghi-r.1	107913207	uncharacterized LOC107913207
ghi-r.1	107933349	uncharacterized LOC107933349
ghi-r.1	107935596	uncharacterized LOC107935596
bna-r.1	111197997	uncharacterized LOC111197997
bna-r.1	106406689	uncharacterized LOC106406689
bna-r.1	125604090	uncharacterized LOC125604090
sot-r.1	102581774	uncharacterized LOC102581774
sot-r.1	102586986	uncharacterized LOC102586986
cit-r.1	102630693	uncharacterized LOC102630693
cit-r.1	102623920	uncharacterized LOC102623920
nta-r.1	107823312	uncharacterized LOC107823312
nta-r.1	107827904	uncharacterized LOC107827904
nta-r.1	107768084	uncharacterized LOC107768084

Top 50 coexpressed genes to 8083554 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8083554 (sbi-r.1 coexpression data)

CoexMap"8083554"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002444522.2 [sequence] [blastp]
XP_021321106.1 [sequence] [blastp]
XP_021321107.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 2	(predict for XP_002444522.2)
nucl 9	(predict for XP_021321106.1)
nucl 6, chlo 2, cyto 1, cysk 1	(predict for XP_021321107.1)

Subcellular
localization
TargetP

mito 4, chlo 4	(predict for XP_002444522.2)
chlo 8	(predict for XP_021321106.1)
chlo 8	(predict for XP_021321107.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8083554	sbi-r.1 for 8083240	zma-u.5 for 109940910	zma-u.5 for 103647498	zma-u.5 for 100304433	osa-u.5 for 9267781	osa-u.5 for 4347301	tae-r.2 for 123112249	tae-r.2 for 123121767	tae-r.2 for 123104016	hvu-r.1 for 123398847	bdi-r.1 for 100826809	ath-u.5 for AT4G37080	ath-u.5 for AT5G42690	gma-u.5 for 100794704	gma-u.5 for 100801978	gma-u.5 for 100807554	sly-u.5 for 101262306	sly-u.5 for 101247483	bra-r.6 for 103835014	bra-r.6 for 103839293	bra-r.6 for 103863524	vvi-u.5 for 100266128	vvi-u.5 for 100256691	ppo-u.5 for 18104939	ppo-u.5 for 7483129	mtr-u.5 for 11431804	mtr-u.5 for 11406128	mtr-u.5 for 11417890	ghi-r.1 for 107913207	ghi-r.1 for 107933349	ghi-r.1 for 107935596	bna-r.1 for 111197997	bna-r.1 for 106406689	bna-r.1 for 125604090	sot-r.1 for 102581774	sot-r.1 for 102586986	cit-r.1 for 102630693	cit-r.1 for 102623920	nta-r.1 for 107823312	nta-r.1 for 107827904	nta-r.1 for 107768084

Ortholog

Ortholog ID: 2577

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8083554

uncharacterized LOC8083240

rho GTPase-activating protein 7

Ternary complex factor MIP1-like protein

uncharacterized LOC100304433

uncharacterized LOC9267781

uncharacterized LOC4347301

uncharacterized LOC123112249

uncharacterized LOC123121767

uncharacterized LOC123104016

uncharacterized LOC123398847

uncharacterized LOC100826809

ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)

transcription factor, putative (Protein of unknown function, DUF547)

uncharacterized LOC100794704

uncharacterized LOC100814669

uncharacterized LOC100818982

uncharacterized LOC101262306

uncharacterized LOC101247483

uncharacterized LOC103835014

uncharacterized LOC103839293

uncharacterized LOC103863524

uncharacterized LOC100266128

uncharacterized LOC100256691

uncharacterized LOC18104939

uncharacterized LOC7483129

uncharacterized LOC11431804

uncharacterized LOC11406128

uncharacterized LOC11417890

uncharacterized LOC107940673

uncharacterized LOC107901482

uncharacterized LOC107958094

uncharacterized LOC111197997

uncharacterized LOC106406689

uncharacterized LOC106389827

uncharacterized LOC102581774

uncharacterized LOC102586986

uncharacterized LOC102630693

uncharacterized LOC102623920

uncharacterized LOC107827904

uncharacterized LOC107768084

uncharacterized LOC107811204

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04145	Phagosome	2
zma04517	IgSF CAM signaling	2
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00402	Benzoxazinoid biosynthesis	4
tae00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00620	Pyruvate metabolism	2
hvu00630	Glyoxylate and dicarboxylate metabolism	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7

Expression

Expression pattern

Entrez Gene ID^*

8083554

8083240

109940910

103647498

100304433

9267781

4347301

123112249

123121767

123104016

123398847

100826809

829862

834278

100794704

100814669

100818982

101262306

101247483

103835014

103839293

103863524

100266128

100256691

18104939

7483129

11431804

11406128

11417890

107940673

107901482

107958094

111197997

106406689

106389827

102581774

102586986

102630693

102623920

107827904

107768084

107811204

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	3	1	1	2	3	2	3	2	2	3	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8083554 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8083554 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**