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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106406850   high mobility group B protein 9 
 bra-r.6   103870177   high mobility group B protein 10 
 ath-u.5   AT3G13350   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein 
 ath-u.5   AT1G04880   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein 
 ghi-r.1   107887235   high mobility group B protein 15 
 ghi-r.1   107951367   high mobility group B protein 10 
 ghi-r.1   107902663   high mobility group B protein 9 
 cit-r.1   102625335   high mobility group B protein 9 
 cit-r.1   102622657   high mobility group B protein 10 
 cit-r.1   102613632   high mobility group B protein 15 
 gma-u.5   100807028   high mobility group B protein 15 
 gma-u.5   100793029   high mobility group B protein 10 
 vvi-u.5   100266033   high mobility group B protein 9 
 vvi-u.5   100260501   high mobility group B protein 15 
 vvi-u.5   100244598   high mobility group B protein 10 
 ppo-u.5   18107070   high mobility group B protein 15 
 ppo-u.5   18103569   high mobility group B protein 10 
 mtr-u.5   11414168   high mobility group B protein 10 
 mtr-u.5   11440754   high mobility group B protein 15 
 sly-u.5   101265586   high mobility group B protein 15 
 sly-u.5   101251156   high mobility group B protein 10 
 sly-u.5   101249807   high mobility group B protein 9 
 sot-r.1   102602134   high mobility group B protein 10 
 sot-r.1   102584805   high mobility group B protein 9 
 sot-r.1   102578765   high mobility group B protein 15-like 
 nta-r.1   107801075   high mobility group B protein 10 
 nta-r.1   107764183   high mobility group B protein 15-like 
 nta-r.1   107777696   high mobility group B protein 15 
 osa-u.5   4329340   high mobility group B protein 15 
 zma-u.5   100277834   uncharacterized LOC100277834 
 zma-u.5   100280617   HMG box family protein 
 tae-r.2   123144497   high mobility group B protein 9 
 tae-r.2   123127383   high mobility group B protein 9 
 tae-r.2   123137041   high mobility group B protein 9 
 hvu-r.1   123402051   high mobility group B protein 9-like 
 sbi-r.1   8084502   high mobility group B protein 15 
 bdi-r.1   100842658   high mobility group B protein 15 
 cre-r.1   CHLRE_13g571050v5   uncharacterized protein 

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Top 50 coexpressed genes to 106406850 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106406850 (bna-r.1 coexpression data)

CoexMap"106406850"


bnaLOC106406850 | Entrez gene ID : 106406850    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 3 2 2 3 3 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013703041.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013703041.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_013703041.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106406850
bra-r.6
for
103870177
ath-u.5
for
AT3G13350
ath-u.5
for
AT1G04880
ghi-r.1
for
107887235
ghi-r.1
for
107951367
ghi-r.1
for
107902663
cit-r.1
for
102625335
cit-r.1
for
102622657
cit-r.1
for
102613632
gma-u.5
for
100807028
gma-u.5
for
100793029
vvi-u.5
for
100266033
vvi-u.5
for
100260501
vvi-u.5
for
100244598
ppo-u.5
for
18107070
ppo-u.5
for
18103569
mtr-u.5
for
11414168
mtr-u.5
for
11440754
sly-u.5
for
101265586
sly-u.5
for
101251156
sly-u.5
for
101249807
sot-r.1
for
102602134
sot-r.1
for
102584805
sot-r.1
for
102578765
nta-r.1
for
107801075
nta-r.1
for
107764183
nta-r.1
for
107777696
osa-u.5
for
4329340
zma-u.5
for
100277834
zma-u.5
for
100280617
tae-r.2
for
123144497
tae-r.2
for
123127383
tae-r.2
for
123137041
hvu-r.1
for
123402051
sbi-r.1
for
8084502
bdi-r.1
for
100842658
cre-r.1
for
CHLRE_13g571050v5


Ortholog ID: 1577
Species bra ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC103844207 AT3G13350 AT1G76110 LOC107951367 LOC107916804 LOC107919872 LOC102625335 LOC102622657 LOC102613632 LOC100807028 LOC100784746 LOC100789037 LOC100266033 LOC100260501 LOC100244598 LOC18103569 LOC7485626 LOC11414168 LOC11440754 LOC101265586 LOC101251156 LOC101249807 LOC102602134 LOC102584805 LOC102578765 LOC107831352 LOC107805066 LOC107803693 LOC4329340 LOC100277834 LOC100280617 LOC123144497 LOC123127383 LOC123137041 LOC123402051 LOC8084502 LOC100842658 CHLRE_13g571050v5
Function* high mobility group B protein 15 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein high mobility group B protein 10 high mobility group B protein 15 high mobility group B protein 10 high mobility group B protein 9 high mobility group B protein 10 high mobility group B protein 15 high mobility group B protein 15 high mobility group B protein 9 high mobility group B protein 10-like high mobility group B protein 9 high mobility group B protein 15 high mobility group B protein 10 high mobility group B protein 10 high mobility group B protein 9 high mobility group B protein 10 high mobility group B protein 15 high mobility group B protein 15 high mobility group B protein 10 high mobility group B protein 9 high mobility group B protein 10 high mobility group B protein 9 high mobility group B protein 15-like high mobility group B protein 9 high mobility group B protein 15 high mobility group B protein 10-like high mobility group B protein 15 uncharacterized LOC100277834 HMG box family protein high mobility group B protein 9 high mobility group B protein 9 high mobility group B protein 9 high mobility group B protein 9-like high mobility group B protein 15 high mobility group B protein 15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
ath00030 Pentose phosphate pathway 2
ath01200 Carbon metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma04626 Plant-pathogen interaction 2
gma04712 Circadian rhythm - plant 2
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma01230 Biosynthesis of amino acids 4
gma00030 Pentose phosphate pathway 3
gma00710 Carbon fixation by Calvin cycle 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00260 Glycine, serine and threonine metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly01230 Biosynthesis of amino acids 4
sly00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi01230 Biosynthesis of amino acids 3
bdi00051 Fructose and mannose metabolism 2
bdi00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103844207 820535 843943 107951367 107916804 107919872 102625335 102622657 102613632 100807028 100784746 100789037 100266033 100260501 100244598 18103569 7485626 11414168 11440754 101265586 101251156 101249807 102602134 102584805 102578765 107831352 107805066 107803693 4329340 100277834 100280617 123144497 123127383 123137041 123402051 8084502 100842658 5719135
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