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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106409608   recQ-mediated genome instability protein 1 
 ath-u.5   RMI1   recQ-mediated instability protein (DUF1767) 
 gma-u.5   100803734   recQ-mediated genome instability protein 1 
 vvi-u.5   100244067   recQ-mediated genome instability protein 1 
 ppo-u.5   7463145   recQ-mediated genome instability protein 1 
 mtr-u.5   25502001   recQ-mediated genome instability protein 1 
 sly-u.5   101258067   recQ-mediated genome instability protein 1-like 
 sly-u.5   101256656   recQ-mediated genome instability protein 1-like 
 osa-u.5   4335680   recQ-mediated genome instability protein 1 
 zma-u.5   100274087   RecQ-mediated genome instability protein 1 

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Top 50 coexpressed genes to 106409608 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106409608 (bna-r.1 coexpression data)

CoexMap"106409608"


bnaLOC106409608 | Entrez gene ID : 106409608    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03460 [list] [network] Fanconi anemia pathway (105 genes)
GO BP
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (18 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (307 genes)  IEA  
GO CC
GO:0031422 [list] [network] RecQ family helicase-topoisomerase III complex  (2 genes)  IEA  
GO:0016604 [list] [network] nuclear body  (60 genes)  IEA  
GO MF
GO:0000166 [list] [network] nucleotide binding  (8037 genes)  IEA  
Protein XP_013705663.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  chlo_mito 3,  mito 1  (predict for XP_013705663.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013705663.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106409608

.
ath-u.5
for
RMI1

.
gma-u.5
for
100803734

.
vvi-u.5
for
100244067

.
ppo-u.5
for
7463145

.
mtr-u.5
for
25502001

.
sly-u.5
for
101258067

.
sly-u.5
for
101256656

.
osa-u.5
for
4335680

.
zma-u.5
for
100274087

.


Ortholog ID: 10416
Species ath gma sly sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol RMI1 LOC100803734 LOC101258067 LOC101256656 LOC4335680 LOC100274087 LOC103837476 LOC100244067 LOC7463145 LOC25502001 LOC123189067 LOC123053153 LOC123426556 LOC107926105 LOC107953572 LOC106409608 CHLRE_17g712450v5 LOC8070976 LOC102591019 LOC102624575 LOC100828863 LOC107825675 LOC107824513
Function* recQ-mediated instability protein (DUF1767) recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1-like recQ-mediated genome instability protein 1-like recQ-mediated genome instability protein 1 RecQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1-like recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 uncharacterized protein recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1 recQ-mediated genome instability protein 1-like recQ-mediated genome instability protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03440 Homologous recombination 5
ath03460 Fanconi anemia pathway 4
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 3
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 6
ppo03430 Mismatch repair 5
ppo03420 Nucleotide excision repair 3
ppo03440 Homologous recombination 3
ppo03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03450 Non-homologous end-joining 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 6
bna03440 Homologous recombination 5
bna03030 DNA replication 4
bna03420 Nucleotide excision repair 3
bna03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 4
bdi03410 Base excision repair 3
bdi03420 Nucleotide excision repair 3
bdi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836473 100803734 101258067 101256656 4335680 100274087 103837476 100244067 7463145 25502001 123189067 123053153 123426556 107926105 107953572 106409608 66056967 8070976 102591019 102624575 100828863 107825675 107824513
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