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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106410865   DNA polymerase zeta catalytic subunit-like 
 bna-r.1   111213528   DNA polymerase zeta catalytic subunit 
 bra-r.6   103831023   DNA polymerase zeta catalytic subunit 
 ath-u.5   REV3   recovery protein 3 
 ghi-r.1   107894311   DNA polymerase zeta catalytic subunit-like 
 ghi-r.1   107899100   DNA polymerase zeta catalytic subunit 
 cit-r.1   102622531   DNA polymerase zeta catalytic subunit 
 gma-u.5   100777934   DNA polymerase zeta catalytic subunit 
 vvi-u.5   100263126   DNA polymerase zeta catalytic subunit 
 ppo-u.5   7473291   DNA polymerase zeta catalytic subunit 
 mtr-u.5   11431309   DNA polymerase zeta catalytic subunit 
 sly-u.5   101266467   DNA polymerase zeta catalytic subunit 
 sot-r.1   102591871   DNA polymerase zeta catalytic subunit 
 nta-r.1   107831863   DNA polymerase zeta catalytic subunit 
 nta-r.1   107768024   DNA polymerase zeta catalytic subunit-like 
 osa-u.5   4344230   DNA polymerase zeta catalytic subunit 
 zma-u.5   103633541   DNA polymerase zeta catalytic subunit 
 tae-r.2   123051636   DNA polymerase zeta catalytic subunit 
 hvu-r.1   123424791   DNA polymerase zeta catalytic subunit 
 sbi-r.1   8074417   DNA polymerase zeta catalytic subunit 
 bdi-r.1   100843632   DNA polymerase zeta catalytic subunit 
 cre-r.1   CHLRE_09g387400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106410865 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106410865 (bna-r.1 coexpression data)

CoexMap"106410865"


bnaLOC106410865 | Entrez gene ID : 106410865    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03460 [list] [network] Fanconi anemia pathway (105 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (13 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (307 genes)  IEA  
GO CC
GO:0016035 [list] [network] zeta DNA polymerase complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (51 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (8037 genes)  IEA  
Protein XP_048591885.1 [sequence] [blastp]
XP_048591886.1 [sequence] [blastp]
XP_048591887.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  cysk 1  (predict for XP_048591885.1)
cyto 4,  nucl 4,  cysk 1  (predict for XP_048591886.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_048591887.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for XP_048591885.1)
other 6,  scret 4  (predict for XP_048591886.1)
other 7  (predict for XP_048591887.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106410865
bna-r.1
for
111213528
bra-r.6
for
103831023
ath-u.5
for
REV3
ghi-r.1
for
107894311
ghi-r.1
for
107899100
cit-r.1
for
102622531
gma-u.5
for
100777934
vvi-u.5
for
100263126
ppo-u.5
for
7473291
mtr-u.5
for
11431309
sly-u.5
for
101266467
sot-r.1
for
102591871
nta-r.1
for
107831863
nta-r.1
for
107768024
osa-u.5
for
4344230
zma-u.5
for
103633541
tae-r.2
for
123051636
hvu-r.1
for
123424791
sbi-r.1
for
8074417
bdi-r.1
for
100843632
cre-r.1
for
CHLRE_09g387400v5


Ortholog ID: 11795
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol LOC106410865 LOC111213528 LOC103831023 REV3 LOC107894311 LOC107899100 LOC102622531 LOC100777934 LOC100263126 LOC7473291 LOC11431309 LOC101266467 LOC102591871 LOC107831863 LOC107768024 LOC4344230 LOC103633541 LOC123051636 LOC123424791 LOC8074417 LOC100843632 CHLRE_09g387400v5
Function* DNA polymerase zeta catalytic subunit-like DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit recovery protein 3 DNA polymerase zeta catalytic subunit-like DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit-like DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit DNA polymerase zeta catalytic subunit uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 9
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi04712 Circadian rhythm - plant 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi04712 Circadian rhythm - plant 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03450 Non-homologous end-joining 2
nta03460 Fanconi anemia pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
sbi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106410865 111213528 103831023 843071 107894311 107899100 102622531 100777934 100263126 7473291 11431309 101266467 102591871 107831863 107768024 4344230 103633541 123051636 123424791 8074417 100843632 5720008
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