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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106411796   SKP1-like protein 21 
 bna-r.1   106450935   SKP1-like protein 20 
 bna-r.1   106450869   SKP1-like protein 20 
 bna-r.1   106432731   SKP1-like protein 21 
 bra-r.6   103866935   SKP1-like protein 20 
 bra-r.6   103830295   SKP1-like protein 21 
 bra-r.6   103841963   SKP1-like protein 21 
 ath-u.5   SK20   SKP1-like 20 
 ath-u.5   SK21   SKP1-like 21 
 ghi-r.1   121202916   SKP1-like protein 21 
 ghi-r.1   107924835   SKP1-like protein 21 
 ghi-r.1   107911525   SKP1-like protein 21 
 cit-r.1   127898613   SKP1-like protein 21 
 cit-r.1   102627808   SKP1-like protein 21 
 cit-r.1   102620512   SKP1-like protein 21 
 gma-u.5   100782740   SKP1-like protein 21 
 gma-u.5   100775387   SKP1-like protein 21 
 gma-u.5   100794666   SKP1-like protein 21 
 vvi-u.5   100265362   SKP1-like protein 21 
 vvi-u.5   100247347   SKP1-like protein 21 
 ppo-u.5   7496974   SKP1-like protein 21 
 ppo-u.5   7454522   SKP1-like protein 21 
 ppo-u.5   7457345   SKP1-like protein 21 
 mtr-u.5   25496528   SKP1-like protein 21 
 mtr-u.5   11445956   SKP1-like protein 21 
 mtr-u.5   11437860   SKP1-like protein 21 
 sly-u.5   101263913   SKP1-like protein 21 
 sly-u.5   101257146   SKP1-like protein 21 
 sot-r.1   102578338   SKP1-like protein 21 
 sot-r.1   102598921   SKP1-like protein 21 
 nta-r.1   107832085   SKP1-like protein 21 
 nta-r.1   107823667   SKP1-like protein 21 
 nta-r.1   107799527   SKP1-like protein 21 
 osa-u.5   4331327   SKP1-like protein 21 
 zma-u.5   103639617   SKP1-like protein 21 
 zma-u.5   100281615   uncharacterized LOC100281615 
 zma-u.5   100304273   SKP1-like protein 21 
 tae-r.2   123093864   SKP1-like protein 21 
 tae-r.2   123099088   SKP1-like protein 21 
 tae-r.2   123106045   SKP1-like protein 21 
 hvu-r.1   123449944   SKP1-like protein 21 
 sbi-r.1   110437409   SKP1-like protein 21 
 sbi-r.1   8081481   SKP1-like protein 21 
 bdi-r.1   100837314   SKP1-like protein 21 

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Top 50 coexpressed genes to 106411796 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106411796 (bna-r.1 coexpression data)

CoexMap"106411796"


bnaLOC106411796 | Entrez gene ID : 106411796    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 2 3 3 2 2 3 1 3 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (170 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (83 genes)  IEA  
Protein XP_013708076.2 [sequence] [blastp]
XP_013708077.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_013708076.2)
nucl 6,  cyto 4  (predict for XP_013708077.2)
Subcellular
localization
TargetP
other 9  (predict for XP_013708076.2)
other 9  (predict for XP_013708077.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106411796
bna-r.1
for
106450935
bna-r.1
for
106450869
bna-r.1
for
106432731
bra-r.6
for
103866935
bra-r.6
for
103830295
bra-r.6
for
103841963
ath-u.5
for
SK20
ath-u.5
for
SK21
ghi-r.1
for
121202916
ghi-r.1
for
107924835
ghi-r.1
for
107911525
cit-r.1
for
127898613
cit-r.1
for
102627808
cit-r.1
for
102620512
gma-u.5
for
100782740
gma-u.5
for
100775387
gma-u.5
for
100794666
vvi-u.5
for
100265362
vvi-u.5
for
100247347
ppo-u.5
for
7496974
ppo-u.5
for
7454522
ppo-u.5
for
7457345
mtr-u.5
for
25496528
mtr-u.5
for
11445956
mtr-u.5
for
11437860
sly-u.5
for
101263913
sly-u.5
for
101257146
sot-r.1
for
102578338
sot-r.1
for
102598921
nta-r.1
for
107832085
nta-r.1
for
107823667
nta-r.1
for
107799527
osa-u.5
for
4331327
zma-u.5
for
103639617
zma-u.5
for
100281615
zma-u.5
for
100304273
tae-r.2
for
123093864
tae-r.2
for
123099088
tae-r.2
for
123106045
hvu-r.1
for
123449944
sbi-r.1
for
110437409
sbi-r.1
for
8081481
bdi-r.1
for
100837314


Ortholog ID: 3095
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC106411796 LOC106412032 LOC106353267 LOC103866935 LOC103830295 LOC103841963 SK20 SK21 LOC107924835 LOC107911525 LOC107900882 LOC127898613 LOC102627808 LOC102620512 LOC100794666 LOC100808004 LOC100785953 LOC100265362 LOC100247347 LOC7496974 LOC7454522 LOC7457345 LOC25496528 LOC11445956 LOC11437860 LOC101263913 LOC101257146 LOC102578338 LOC102598921 LOC107832085 LOC107823667 LOC107820068 LOC4331327 LOC103639617 LOC100281615 LOC100304273 LOC123093864 LOC123099088 LOC123106045 LOC123449944 LOC110437409 LOC8081481 LOC100837314
Function* SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 20 SKP1-like protein 21 SKP1-like protein 21 SKP1-like 20 SKP1-like 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 uncharacterized LOC100281615 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma00592 alpha-Linolenic acid metabolism 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae00970 Aminoacyl-tRNA biosynthesis 4
tae04120 Ubiquitin mediated proteolysis 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03040 Spliceosome 2
tae03008 Ribosome biogenesis in eukaryotes 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00740 Riboflavin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106411796 106412032 106353267 103866935 103830295 103841963 819203 825314 107924835 107911525 107900882 127898613 102627808 102620512 100794666 100808004 100785953 100265362 100247347 7496974 7454522 7457345 25496528 11445956 11437860 101263913 101257146 102578338 102598921 107832085 107823667 107820068 4331327 103639617 100281615 100304273 123093864 123099088 123106045 123449944 110437409 8081481 100837314
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