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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103833779   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ath-u.5   AT4G14050   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107934432   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ghi-r.1   107939127   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 cit-r.1   102613341   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 gma-u.5   100782048   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 vvi-u.5   100249938   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 mtr-u.5   11432733   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sly-u.5   101250161   PPR protein MEF35-like 
 sot-r.1   102600095   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 nta-r.1   107826297   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 osa-u.5   4351063   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 zma-u.5   103630373   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 hvu-r.1   123442819   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sbi-r.1   8058461   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 bdi-r.1   100830012   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 

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Top 50 coexpressed genes to 103833779 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103833779 (bra-r.6 coexpression data)

CoexMap"106412340"


bnaLOC106412340 | Entrez gene ID : 106412340    
Species bra ath ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi bna cre ppo tae
Paralog 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013708716.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  nucl 2,  mito 2,  cyto_mito 1  (predict for XP_013708716.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_013708716.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103833779
ath-u.5
for
AT4G14050
ghi-r.1
for
107934432
ghi-r.1
for
107939127
cit-r.1
for
102613341
gma-u.5
for
100782048
vvi-u.5
for
100249938
mtr-u.5
for
11432733
sly-u.5
for
101250161
sot-r.1
for
102600095
nta-r.1
for
107826297
osa-u.5
for
4351063
zma-u.5
for
103630373
hvu-r.1
for
123442819
sbi-r.1
for
8058461
bdi-r.1
for
100830012


Ortholog ID: 11704
Species bra ath ghi ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi
Symbol LOC103833779 AT4G14050 LOC107934432 LOC107939127 LOC102613341 LOC100782048 LOC100249938 LOC11432733 LOC101250161 LOC102600095 LOC107826297 LOC4351063 LOC103630373 LOC123442819 LOC8058461 LOC100830012
Function* pentatricopeptide repeat-containing protein At4g14050, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial PPR protein MEF35-like pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103833779 827041 107934432 107939127 102613341 100782048 100249938 11432733 101250161 102600095 107826297 4351063 103630373 123442819 8058461 100830012
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