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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106413546   DNA polymerase epsilon catalytic subunit A 
 bna-r.1   106346351   DNA polymerase epsilon catalytic subunit A 
 bra-r.6   103871570   DNA polymerase epsilon catalytic subunit A 
 ath-u.5   TIL1   DNA polymerase epsilon catalytic subunit 
 ghi-r.1   107943981   DNA polymerase epsilon catalytic subunit A 
 ghi-r.1   107959376   DNA polymerase epsilon catalytic subunit A 
 cit-r.1   102608212   DNA polymerase epsilon catalytic subunit A-like 
 gma-u.5   100812003   DNA polymerase epsilon catalytic subunit A 
 gma-u.5   100778115   DNA polymerase epsilon catalytic subunit A-like 
 vvi-u.5   100241432   DNA polymerase epsilon catalytic subunit A 
 ppo-u.5   18097958   DNA polymerase epsilon catalytic subunit A-like 
 mtr-u.5   11445193   DNA polymerase epsilon catalytic subunit A 
 sly-u.5   101253967   DNA polymerase epsilon catalytic subunit A-like 
 sot-r.1   102599922   DNA polymerase epsilon catalytic subunit A-like 
 nta-r.1   107791916   DNA polymerase epsilon catalytic subunit A 
 nta-r.1   107775468   DNA polymerase epsilon catalytic subunit A 
 osa-u.5   4329458   DNA polymerase epsilon catalytic subunit A 
 zma-u.5   103627197   DNA polymerase epsilon catalytic subunit A 
 tae-r.2   123078194   DNA polymerase epsilon catalytic subunit A 
 tae-r.2   123042280   DNA polymerase epsilon catalytic subunit A 
 tae-r.2   123180924   DNA polymerase epsilon catalytic subunit A 
 hvu-r.1   123429570   DNA polymerase epsilon catalytic subunit A-like 
 sbi-r.1   8056089   DNA polymerase epsilon catalytic subunit A 
 bdi-r.1   100829409   DNA polymerase epsilon catalytic subunit A 
 cre-r.1   CHLRE_03g179961v5   uncharacterized protein 

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Top 50 coexpressed genes to 106413546 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106413546 (bna-r.1 coexpression data)

CoexMap"106413546"


bnaLOC106413546 | Entrez gene ID : 106413546    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03030 [list] [network] DNA replication (118 genes)
bna03410 [list] [network] Base excision repair (126 genes)
bna03420 [list] [network] Nucleotide excision repair (233 genes)
GO BP
GO:0006287 [list] [network] base-excision repair, gap-filling  (4 genes)  IEA  
GO:0045004 [list] [network] DNA replication proofreading  (4 genes)  IEA  
GO:0006297 [list] [network] nucleotide-excision repair, DNA gap filling  (8 genes)  IEA  
GO:0006272 [list] [network] leading strand elongation  (16 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (556 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (669 genes)  IEA  
GO CC
GO:0008622 [list] [network] epsilon DNA polymerase complex  (7 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008310 [list] [network] single-stranded DNA 3'-5' DNA exonuclease activity  (2 genes)  IEA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (51 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (8037 genes)  IEA  
Protein XP_048613840.1 [sequence] [blastp]
XP_048613842.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_048613840.1)
nucl 5,  cyto 4  (predict for XP_048613842.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048613840.1)
other 7  (predict for XP_048613842.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106413546
bna-r.1
for
106346351
bra-r.6
for
103871570
ath-u.5
for
TIL1
ghi-r.1
for
107943981
ghi-r.1
for
107959376
cit-r.1
for
102608212
gma-u.5
for
100812003
gma-u.5
for
100778115
vvi-u.5
for
100241432
ppo-u.5
for
18097958
mtr-u.5
for
11445193
sly-u.5
for
101253967
sot-r.1
for
102599922
nta-r.1
for
107791916
nta-r.1
for
107775468
osa-u.5
for
4329458
zma-u.5
for
103627197
tae-r.2
for
123078194
tae-r.2
for
123042280
tae-r.2
for
123180924
hvu-r.1
for
123429570
sbi-r.1
for
8056089
bdi-r.1
for
100829409
cre-r.1
for
CHLRE_03g179961v5


Ortholog ID: 9400
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106413546 LOC106346351 LOC103871570 TIL1 LOC107943981 LOC107959376 LOC102608212 LOC100812003 LOC100778115 LOC100241432 LOC18097958 LOC11445193 LOC101253967 LOC102599922 LOC107791916 LOC107775468 LOC4329458 LOC103627197 LOC123078194 LOC123042280 LOC123180924 LOC123429570 LOC8056089 LOC100829409 CHLRE_03g179961v5
Function* DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A-like DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon catalytic subunit A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
bna00531 Glycosaminoglycan degradation 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
bna00531 Glycosaminoglycan degradation 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra03030 DNA replication 2
bra03440 Homologous recombination 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03440 Homologous recombination 4
ath03410 Base excision repair 3
ath03430 Mismatch repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 9
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03440 Homologous recombination 4
gma03430 Mismatch repair 3
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03440 Homologous recombination 4
vvi03410 Base excision repair 3
vvi03420 Nucleotide excision repair 3
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 3
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03460 Fanconi anemia pathway 4
sot03440 Homologous recombination 4
sot03030 DNA replication 4
sot00270 Cysteine and methionine metabolism 3
sot03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 3
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 3
zma03430 Mismatch repair 3
zma03030 DNA replication 3
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106413546 106346351 103871570 837346 107943981 107959376 102608212 100812003 100778115 100241432 18097958 11445193 101253967 102599922 107791916 107775468 4329458 103627197 123078194 123042280 123180924 123429570 8056089 100829409 5728795
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