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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415248   photosystem I reaction center subunit XI, chloroplastic-like 
 bna-r.1   106429320   photosystem I reaction center subunit XI, chloroplastic 
 bna-r.1   111201397   photosystem I reaction center subunit XI, chloroplastic-like 
 bna-r.1   106400936   photosystem I reaction center subunit XI, chloroplastic 
 bra-r.6   103863666   photosystem I reaction center subunit XI, chloroplastic 
 bra-r.6   117127362   photosystem I reaction center subunit XI, chloroplastic 
 ath-u.5   PSAL   photosystem I subunit l 
 ghi-r.1   107933978   photosystem I reaction center subunit XI, chloroplastic 
 ghi-r.1   107895184   photosystem I reaction center subunit XI, chloroplastic 
 ghi-r.1   107954721   photosystem I reaction center subunit XI, chloroplastic 
 cit-r.1   102609622   photosystem I reaction center subunit XI, chloroplastic 
 gma-u.5   100527240   uncharacterized LOC100527240 
 gma-u.5   100500317   uncharacterized LOC100500317 
 vvi-u.5   100242802   photosystem I reaction center subunit XI, chloroplastic 
 ppo-u.5   7463368   photosystem I reaction center subunit XI, chloroplastic 
 ppo-u.5   7471126   photosystem I reaction center subunit XI, chloroplastic 
 mtr-u.5   11408159   photosystem I reaction center subunit XI, chloroplastic 
 sly-u.5   101265555   photosystem I reaction center subunit XI, chloroplastic 
 sly-u.5   101265249   photosystem I reaction center subunit XI, chloroplastic 
 sot-r.1   102592564   photosystem I reaction center subunit XI, chloroplastic 
 sot-r.1   102602832   photosystem I reaction center subunit XI, chloroplastic 
 sot-r.1   102592900   photosystem I reaction center subunit XI, chloroplastic-like 
 nta-r.1   107810830   photosystem I reaction center subunit XI, chloroplastic-like 
 nta-r.1   107769513   photosystem I reaction center subunit XI, chloroplastic 
 nta-r.1   107768925   photosystem I reaction center subunit XI, chloroplastic-like 
 osa-u.5   4352085   photosystem I reaction center subunit XI, chloroplastic 
 zma-u.5   100383080   uncharacterized LOC100383080 
 zma-u.5   100281679   photosystem I reaction center subunit XI 
 tae-r.2   123060002   photosystem I reaction center subunit XI, chloroplastic 
 tae-r.2   123076982   photosystem I reaction center subunit XI, chloroplastic 
 tae-r.2   123068464   photosystem I reaction center subunit XI, chloroplastic 
 hvu-r.1   123442593   photosystem I reaction center subunit XI, chloroplastic 
 sbi-r.1   8078487   photosystem I reaction center subunit XI, chloroplastic 
 bdi-r.1   100837816   photosystem I reaction center subunit XI, chloroplastic 
 cre-r.1   CHLRE_12g486300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106415248 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415248 (bna-r.1 coexpression data)

CoexMap"106415248"


bnaLOC106415248 | Entrez gene ID : 106415248    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 1 2 1 2 3 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (408 genes)  IEA  
GO CC
GO:0009538 [list] [network] photosystem I reaction center  (24 genes)  IEA  
GO:0009522 [list] [network] photosystem I  (65 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
Protein XP_013711352.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  vacu 1  (predict for XP_013711352.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_013711352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415248
bna-r.1
for
106429320
bna-r.1
for
111201397
bna-r.1
for
106400936
bra-r.6
for
103863666
bra-r.6
for
117127362
ath-u.5
for
PSAL
ghi-r.1
for
107933978
ghi-r.1
for
107895184
ghi-r.1
for
107954721
cit-r.1
for
102609622
gma-u.5
for
100527240
gma-u.5
for
100500317
vvi-u.5
for
100242802
ppo-u.5
for
7463368
ppo-u.5
for
7471126
mtr-u.5
for
11408159
sly-u.5
for
101265555
sly-u.5
for
101265249
sot-r.1
for
102592564
sot-r.1
for
102602832
sot-r.1
for
102592900
nta-r.1
for
107810830
nta-r.1
for
107769513
nta-r.1
for
107768925
osa-u.5
for
4352085
zma-u.5
for
100383080
zma-u.5
for
100281679
tae-r.2
for
123060002
tae-r.2
for
123076982
tae-r.2
for
123068464
hvu-r.1
for
123442593
sbi-r.1
for
8078487
bdi-r.1
for
100837816
cre-r.1
for
CHLRE_12g486300v5


Ortholog ID: 5540
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106415248 LOC106429320 LOC111201397 LOC103863666 LOC117127362 PSAL LOC107933978 LOC107954721 LOC107954007 LOC102609622 LOC100527240 LOC100500317 LOC100242802 LOC7463368 LOC7471126 LOC11408159 LOC101265555 LOC101265249 LOC102592564 LOC102602832 LOC102592900 LOC107810830 LOC107768925 LOC107768924 LOC4352085 LOC100383080 LOC100281679 LOC123060002 LOC123076982 LOC123068464 LOC123442593 LOC8078487 LOC100837816 CHLRE_12g486300v5
Function* photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I subunit l photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic uncharacterized LOC100527240 uncharacterized LOC100500317 photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic uncharacterized LOC100383080 photosystem I reaction center subunit XI photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 12
bra00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 13
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 8
ghi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 12
ghi00860 Porphyrin metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 8
ghi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 15
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 15
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 9
osa00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
zma00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 10
zma00196 Photosynthesis - antenna proteins 7
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 11
tae00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 11
tae00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 10
tae00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 9
hvu00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 10
bdi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 8
cre00196 Photosynthesis - antenna proteins 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106415248 106429320 111201397 103863666 117127362 826892 107933978 107954721 107954007 102609622 100527240 100500317 100242802 7463368 7471126 11408159 101265555 101265249 102592564 102602832 102592900 107810830 107768925 107768924 4352085 100383080 100281679 123060002 123076982 123068464 123442593 8078487 100837816 5716624
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