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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g486300v5   uncharacterized protein 
 ath-u.5   PSAL   photosystem I subunit l 
 gma-u.5   100527240   uncharacterized LOC100527240 
 gma-u.5   100500317   uncharacterized LOC100500317 
 sly-u.5   101265555   photosystem I reaction center subunit XI, chloroplastic 
 sly-u.5   101265249   photosystem I reaction center subunit XI, chloroplastic 
 osa-u.5   4352085   photosystem I reaction center subunit XI, chloroplastic 
 zma-u.5   100281679   photosystem I reaction center subunit XI 
 zma-u.5   100383080   uncharacterized LOC100383080 
 vvi-u.5   100242802   photosystem I reaction center subunit XI, chloroplastic 
 ppo-u.5   7463368   photosystem I reaction center subunit XI, chloroplastic 
 ppo-u.5   7471126   photosystem I reaction center subunit XI, chloroplastic 
 mtr-u.5   11408159   photosystem I reaction center subunit XI, chloroplastic 

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Top 50 coexpressed genes to CHLRE_12g486300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g486300v5 (cre-r.1 coexpression data)

CoexMap"5716624"


creCHLRE_12g486300v5 | Entrez gene ID : 5716624      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 2 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00195 [list] [network] Photosynthesis (62 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (64 genes)  IEA  
GO CC
GO:0009538 [list] [network] photosystem I reaction center  (5 genes)  IEA  
GO:0009522 [list] [network] photosystem I  (9 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
Protein XP_001691084.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_001691084.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_001691084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g486300v5

.
ath-u.5
for
PSAL

.
gma-u.5
for
100527240

.
gma-u.5
for
100500317

.
sly-u.5
for
101265555

.
sly-u.5
for
101265249

.
osa-u.5
for
4352085

.
zma-u.5
for
100281679

.
zma-u.5
for
100383080

.
vvi-u.5
for
100242802

.
ppo-u.5
for
7463368

.
ppo-u.5
for
7471126

.
mtr-u.5
for
11408159

.


Ortholog ID: 5540
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PSAL LOC100500317 LOC100527240 LOC101265249 LOC101265555 LOC4352085 LOC100281679 LOC100383080 LOC103863666 LOC117127362 LOC100242802 LOC7471126 LOC7463368 LOC11408159 LOC123060002 LOC123068464 LOC123442593 LOC107933978 LOC107954721 LOC111201397 LOC106429320 CHLRE_12g486300v5 LOC8078487 LOC102592564 LOC102602832 LOC102609622 LOC100837816 LOC107810830 LOC107768924
Function* photosystem I subunit l uncharacterized LOC100500317 uncharacterized LOC100527240 photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI uncharacterized LOC100383080 photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic uncharacterized protein photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic photosystem I reaction center subunit XI, chloroplastic-like photosystem I reaction center subunit XI, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 9
osa00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 10
zma00196 Photosynthesis - antenna proteins 7
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
zma00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 12
bra00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 13
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 11
tae00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 10
tae00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 9
hvu00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 8
ghi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 12
ghi00860 Porphyrin metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 8
cre00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 15
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 10
bdi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826892 100500317 100527240 101265249 101265555 4352085 100281679 100383080 103863666 117127362 100242802 7471126 7463368 11408159 123060002 123068464 123442593 107933978 107954721 111201397 106429320 5716624 8078487 102592564 102602832 102609622 100837816 107810830 107768924
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